Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.32□□□□□ -1.56
CD40P25942 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 OR52B5P-202ENST00000641118 1110 ntBASIC5.32□□□□□ -1.56
CD40P25942 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.32□□□□□ -1.56
CD40P25942 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 AP001541.1-201ENST00000623322 1904 ntBASIC5.32□□□□□ -1.56
CD40P25942 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.32□□□□□ -1.56
CD40P25942 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.32□□□□□ -1.56
CD40P25942 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.32□□□□□ -1.56
CD40P25942 CSDE1-203ENST00000358528 4076 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
CD40P25942 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.31□□□□□ -1.56
CD40P25942 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 DOCK4-216ENST00000494651 3282 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 AC119674.1-213ENST00000641177 1386 ntBASIC5.31□□□□□ -1.56
CD40P25942 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 Z98257.1-202ENST00000431027 2493 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.31□□□□□ -1.56
CD40P25942 OR5F1-201ENST00000278409 945 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CD40P25942 RNU1-85P-201ENST00000364127 164 ntBASIC5.31□□□□□ -1.56
CD40P25942 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
CD40P25942 OR6C69P-201ENST00000394268 893 ntBASIC5.31□□□□□ -1.56
CD40P25942 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 AC025750.1-201ENST00000399891 379 ntBASIC5.31□□□□□ -1.56
CD40P25942 AL390316.1-201ENST00000406279 553 ntBASIC5.31□□□□□ -1.56
CD40P25942 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 AL139128.1-201ENST00000413921 941 ntBASIC5.31□□□□□ -1.56
CD40P25942 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC5.31□□□□□ -1.56
CD40P25942 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC5.31□□□□□ -1.56
CD40P25942 AC010975.2-201ENST00000427781 588 ntBASIC5.31□□□□□ -1.56
CD40P25942 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.31□□□□□ -1.56
CD40P25942 FTLP8-201ENST00000446770 267 ntBASIC5.31□□□□□ -1.56
CD40P25942 VN1R10P-201ENST00000447106 875 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC239367.2-201ENST00000447309 705 ntBASIC5.31□□□□□ -1.56
CD40P25942 RPL39P6-201ENST00000448289 150 ntBASIC5.31□□□□□ -1.56
CD40P25942 AL358876.1-201ENST00000453364 1075 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC068522.1-201ENST00000482895 345 ntBASIC5.31□□□□□ -1.56
CD40P25942 RAD51AP1P1-201ENST00000484195 1001 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.31□□□□□ -1.56
CD40P25942 AC109927.2-201ENST00000506416 303 ntBASIC5.31□□□□□ -1.56
CD40P25942 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 ST13P12-201ENST00000508958 1094 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC5.31□□□□□ -1.56
CD40P25942 MTND5P4-201ENST00000514978 288 ntBASIC5.31□□□□□ -1.56
CD40P25942 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 RNA5SP340-201ENST00000517132 107 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC025881.1-201ENST00000518851 512 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC5.31□□□□□ -1.56
CD40P25942 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC5.31□□□□□ -1.56
CD40P25942 NPM1P6-201ENST00000521088 871 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC008429.4-201ENST00000521201 182 ntBASIC5.31□□□□□ -1.56
CD40P25942 OR5G4P-201ENST00000525251 760 ntBASIC5.31□□□□□ -1.56
CD40P25942 AP005639.1-201ENST00000526939 192 ntBASIC5.31□□□□□ -1.56
CD40P25942 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 CASP1-212ENST00000531166 300 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 AP004609.2-201ENST00000532177 190 ntBASIC5.31□□□□□ -1.56
CD40P25942 AP002453.2-201ENST00000533503 320 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC016957.1-201ENST00000534895 309 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.31□□□□□ -1.56
CD40P25942 AL389895.1-201ENST00000554127 252 ntBASIC5.31□□□□□ -1.56
CD40P25942 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.31□□□□□ -1.56
CD40P25942 SULT1C2P1-202ENST00000562418 459 ntBASIC5.31□□□□□ -1.56
CD40P25942 MIR3189-201ENST00000578735 73 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC091193.1-201ENST00000604640 448 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC006566.1-201ENST00000608943 513 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC103710.4-201ENST00000609301 899 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC027807.2-201ENST00000616099 408 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.31□□□□□ -1.56
CD40P25942 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 AC129915.3-201ENST00000634128 948 ntBASIC5.31□□□□□ -1.56
CD40P25942 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 CFAP47-202ENST00000313548 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.31□□□□□ -1.56
CD40P25942 AC107081.3-201ENST00000612715 2034 ntBASIC5.31□□□□□ -1.56
CD40P25942 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.31□□□□□ -1.56
CD40P25942 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.31□□□□□ -1.56
CD40P25942 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 LINC00561-201ENST00000565815 2738 ntBASIC5.31□□□□□ -1.56
CD40P25942 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 OR4G11P-202ENST00000642116 1414 ntBASIC5.31□□□□□ -1.56
CD40P25942 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
CD40P25942 FTO-215ENST00000636491 1676 ntTSL 5 BASIC5.31□□□□□ -1.56
CD40P25942 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.3□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms