Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 SNRPBP1-201ENST00000443634 282 ntBASIC7.18□□□□□ -1.26
RFX1P22670 GAPDHP20-201ENST00000444107 1007 ntBASIC7.18□□□□□ -1.26
RFX1P22670 PFN1P11-201ENST00000445829 389 ntBASIC7.18□□□□□ -1.26
RFX1P22670 AC022431.1-201ENST00000450941 438 ntBASIC7.18□□□□□ -1.26
RFX1P22670 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC7.18□□□□□ -1.26
RFX1P22670 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC7.18□□□□□ -1.26
RFX1P22670 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC7.18□□□□□ -1.26
RFX1P22670 OR6K1P-201ENST00000456766 971 ntBASIC7.18□□□□□ -1.26
RFX1P22670 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
RFX1P22670 RNU7-136P-201ENST00000458819 69 ntBASIC7.18□□□□□ -1.26
RFX1P22670 RPS15AP17-201ENST00000470598 390 ntBASIC7.18□□□□□ -1.26
RFX1P22670 RAD51AP1P1-201ENST00000484195 1001 ntBASIC7.18□□□□□ -1.26
RFX1P22670 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC7.18□□□□□ -1.26
RFX1P22670 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC7.18□□□□□ -1.26
RFX1P22670 IGHV7-34-1-201ENST00000519200 350 ntBASIC7.18□□□□□ -1.26
RFX1P22670 AC018442.3-201ENST00000523025 183 ntBASIC7.18□□□□□ -1.26
RFX1P22670 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.18□□□□□ -1.26
RFX1P22670 AC063926.1-201ENST00000539532 415 ntTSL 2 BASIC7.18□□□□□ -1.26
RFX1P22670 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC7.18□□□□□ -1.26
RFX1P22670 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC7.18□□□□□ -1.26
RFX1P22670 AC090515.3-201ENST00000560431 315 ntBASIC7.18□□□□□ -1.26
RFX1P22670 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC7.18□□□□□ -1.26
RFX1P22670 AP003115.1-201ENST00000569849 463 ntBASIC7.18□□□□□ -1.26
RFX1P22670 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC7.18□□□□□ -1.26
RFX1P22670 NRBF2P1-201ENST00000587407 859 ntBASIC7.18□□□□□ -1.26
RFX1P22670 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC7.18□□□□□ -1.26
RFX1P22670 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC7.18□□□□□ -1.26
RFX1P22670 AL139286.1-201ENST00000604465 483 ntBASIC7.18□□□□□ -1.26
RFX1P22670 AL359999.1-201ENST00000604513 294 ntBASIC7.18□□□□□ -1.26
RFX1P22670 AC008945.2-201ENST00000606056 604 ntBASIC7.18□□□□□ -1.26
RFX1P22670 AL451049.1-201ENST00000608672 497 ntBASIC7.18□□□□□ -1.26
RFX1P22670 CAMK2D-202ENST00000342666 1940 ntTSL 5 BASIC7.18□□□□□ -1.26
RFX1P22670 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 HSPA8P17-201ENST00000427029 1382 ntBASIC7.18□□□□□ -1.26
RFX1P22670 HDAC1P2-201ENST00000453661 1398 ntBASIC7.18□□□□□ -1.26
RFX1P22670 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC7.18□□□□□ -1.26
RFX1P22670 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC7.18□□□□□ -1.26
RFX1P22670 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
RFX1P22670 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC7.18□□□□□ -1.26
RFX1P22670 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.18□□□□□ -1.26
RFX1P22670 TEK-202ENST00000406359 3935 ntTSL 2 BASIC7.18□□□□□ -1.26
RFX1P22670 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
RFX1P22670 LRRC37A3-203ENST00000339474 2589 ntTSL 2 BASIC7.17□□□□□ -1.26
RFX1P22670 C1orf27-202ENST00000367470 3754 ntTSL 5 BASIC7.17□□□□□ -1.26
RFX1P22670 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC7.17□□□□□ -1.26
RFX1P22670 AC104162.1-201ENST00000430831 2382 ntBASIC7.17□□□□□ -1.26
RFX1P22670 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
RFX1P22670 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 CASC19-228ENST00000641414 1684 ntBASIC7.17□□□□□ -1.26
RFX1P22670 SH2D1B-201ENST00000367929 2523 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
RFX1P22670 STAG3L4-201ENST00000352103 530 ntBASIC7.17□□□□□ -1.26
RFX1P22670 RN7SKP15-201ENST00000364742 309 ntBASIC7.17□□□□□ -1.26
RFX1P22670 Y_RNA.402-201ENST00000383972 102 ntBASIC7.17□□□□□ -1.26
RFX1P22670 CALM2P3-201ENST00000400429 449 ntBASIC7.17□□□□□ -1.26
RFX1P22670 AL023284.3-201ENST00000407767 334 ntBASIC7.17□□□□□ -1.26
RFX1P22670 PMS2P3-203ENST00000422064 567 ntTSL 5 BASIC7.17□□□□□ -1.26
RFX1P22670 TRIM60P3Y-201ENST00000432201 673 ntBASIC7.17□□□□□ -1.26
RFX1P22670 AL645939.3-201ENST00000435408 225 ntBASIC7.17□□□□□ -1.26
RFX1P22670 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC7.17□□□□□ -1.26
RFX1P22670 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.17□□□□□ -1.26
RFX1P22670 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 AKR1D1P1-201ENST00000457236 936 ntBASIC7.17□□□□□ -1.26
RFX1P22670 MTCO3P2-201ENST00000457365 171 ntBASIC7.17□□□□□ -1.26
RFX1P22670 AC069439.1-201ENST00000494739 167 ntBASIC7.17□□□□□ -1.26
RFX1P22670 AL390198.2-201ENST00000510553 222 ntBASIC7.17□□□□□ -1.26
RFX1P22670 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.17□□□□□ -1.26
RFX1P22670 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
RFX1P22670 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC7.17□□□□□ -1.26
RFX1P22670 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC7.17□□□□□ -1.26
RFX1P22670 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC7.17□□□□□ -1.26
RFX1P22670 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC7.17□□□□□ -1.26
RFX1P22670 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC7.17□□□□□ -1.26
RFX1P22670 AC067852.5-201ENST00000589299 310 ntBASIC7.17□□□□□ -1.26
RFX1P22670 AC022916.3-201ENST00000592961 742 ntBASIC7.17□□□□□ -1.26
RFX1P22670 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC7.17□□□□□ -1.26
RFX1P22670 DUXAP4-201ENST00000603046 613 ntBASIC7.17□□□□□ -1.26
RFX1P22670 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC7.17□□□□□ -1.26
RFX1P22670 AC012254.5-201ENST00000623573 478 ntBASIC7.17□□□□□ -1.26
RFX1P22670 AC022400.9-201ENST00000623633 273 ntBASIC7.17□□□□□ -1.26
RFX1P22670 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
RFX1P22670 AC005034.3-201ENST00000604845 1747 ntBASIC7.17□□□□□ -1.26
RFX1P22670 TRPC4-210ENST00000625583 3009 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 OR11H5P-202ENST00000641612 1325 ntBASIC7.17□□□□□ -1.26
RFX1P22670 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
RFX1P22670 AC010624.4-201ENST00000597606 1351 ntBASIC7.17□□□□□ -1.26
RFX1P22670 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 90 ms