Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
TOP2AP11388 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
TOP2AP11388 CASC19-204ENST00000641001 2055 ntBASIC7.31□□□□□ -1.24
TOP2AP11388 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TOP2AP11388 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC7.3□□□□□ -1.24
TOP2AP11388 HSPD1P14-201ENST00000432666 1618 ntBASIC7.3□□□□□ -1.24
TOP2AP11388 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TOP2AP11388 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TOP2AP11388 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC7.3□□□□□ -1.24
TOP2AP11388 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
TOP2AP11388 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC7.3□□□□□ -1.24
TOP2AP11388 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
TOP2AP11388 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
TOP2AP11388 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC7.3□□□□□ -1.24
TOP2AP11388 AC128716.1-201ENST00000475129 166 ntBASIC7.3□□□□□ -1.24
TOP2AP11388 AC007688.1-201ENST00000475592 759 ntBASIC7.3□□□□□ -1.24
TOP2AP11388 KRT19P6-201ENST00000510983 209 ntBASIC7.3□□□□□ -1.24
TOP2AP11388 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC7.3□□□□□ -1.24
TOP2AP11388 AC138832.1-201ENST00000522871 556 ntBASIC7.3□□□□□ -1.24
TOP2AP11388 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC7.3□□□□□ -1.24
TOP2AP11388 SNORA51-201ENST00000606420 132 ntBASIC7.3□□□□□ -1.24
TOP2AP11388 AC069200.1-201ENST00000609511 323 ntBASIC7.3□□□□□ -1.24
TOP2AP11388 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TOP2AP11388 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC7.3□□□□□ -1.24
TOP2AP11388 ERCC6-202ENST00000374127 1782 ntBASIC7.3□□□□□ -1.24
TOP2AP11388 HECW2-201ENST00000260983 11809 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
TOP2AP11388 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC7.29□□□□□ -1.24
TOP2AP11388 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TOP2AP11388 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC7.29□□□□□ -1.24
TOP2AP11388 Z82217.1-201ENST00000625157 8149 ntBASIC7.29□□□□□ -1.24
TOP2AP11388 WDPCP-203ENST00000409120 5408 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TOP2AP11388 AL450992.3-201ENST00000413192 568 ntBASIC7.29□□□□□ -1.24
TOP2AP11388 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.29□□□□□ -1.24
TOP2AP11388 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC7.29□□□□□ -1.24
TOP2AP11388 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC7.29□□□□□ -1.24
TOP2AP11388 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC7.29□□□□□ -1.24
TOP2AP11388 GOT2P5-201ENST00000433995 546 ntBASIC7.29□□□□□ -1.24
TOP2AP11388 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC7.29□□□□□ -1.24
TOP2AP11388 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC7.29□□□□□ -1.24
TOP2AP11388 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
TOP2AP11388 AC090312.1-201ENST00000580637 348 ntBASIC7.29□□□□□ -1.24
TOP2AP11388 AL161756.2-201ENST00000604597 246 ntBASIC7.29□□□□□ -1.24
TOP2AP11388 AL356121.2-201ENST00000624715 780 ntBASIC7.29□□□□□ -1.24
TOP2AP11388 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC7.29□□□□□ -1.24
TOP2AP11388 AL627171.1-201ENST00000618845 1308 ntBASIC7.29□□□□□ -1.24
TOP2AP11388 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
TOP2AP11388 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC7.29□□□□□ -1.24
TOP2AP11388 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC7.29□□□□□ -1.24
TOP2AP11388 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TOP2AP11388 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
TOP2AP11388 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC7.28□□□□□ -1.24
TOP2AP11388 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC7.28□□□□□ -1.24
TOP2AP11388 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC7.28□□□□□ -1.24
TOP2AP11388 OR4A15-201ENST00000314706 1035 ntBASIC7.28□□□□□ -1.24
TOP2AP11388 SNORD66.1-201ENST00000391230 76 ntBASIC7.28□□□□□ -1.24
TOP2AP11388 RPS21P8-201ENST00000413365 247 ntBASIC7.28□□□□□ -1.24
TOP2AP11388 MAP1LC3BP1-201ENST00000417653 379 ntBASIC7.28□□□□□ -1.24
TOP2AP11388 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC7.28□□□□□ -1.24
TOP2AP11388 RPL23AP25-201ENST00000430973 463 ntBASIC7.28□□□□□ -1.24
TOP2AP11388 RPL23AP83-201ENST00000434984 473 ntBASIC7.28□□□□□ -1.24
TOP2AP11388 RPL7P1-201ENST00000468161 747 ntBASIC7.28□□□□□ -1.24
TOP2AP11388 RPL7P9-201ENST00000468715 747 ntBASIC7.28□□□□□ -1.24
TOP2AP11388 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC7.28□□□□□ -1.24
TOP2AP11388 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC7.28□□□□□ -1.24
TOP2AP11388 AC124068.1-201ENST00000563131 678 ntBASIC7.28□□□□□ -1.24
TOP2AP11388 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC7.28□□□□□ -1.24
TOP2AP11388 AL354798.1-201ENST00000622505 329 ntBASIC7.28□□□□□ -1.24
TOP2AP11388 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC7.28□□□□□ -1.24
TOP2AP11388 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC7.28□□□□□ -1.24
TOP2AP11388 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC7.28□□□□□ -1.24
TOP2AP11388 MFSD8-201ENST00000296468 4516 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TOP2AP11388 CCAT2-201ENST00000630920 1752 ntBASIC7.28□□□□□ -1.24
TOP2AP11388 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC7.28□□□□□ -1.24
TOP2AP11388 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.24
TOP2AP11388 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC7.28□□□□□ -1.24
TOP2AP11388 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC7.27□□□□□ -1.24
TOP2AP11388 CNNM2-202ENST00000369878 15857 ntAPPRIS P4 TSL 1 (best) BASIC7.27□□□□□ -1.24
TOP2AP11388 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.24
TOP2AP11388 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC7.27□□□□□ -1.25
TOP2AP11388 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC7.27□□□□□ -1.25
TOP2AP11388 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TOP2AP11388 DNAJA1P1-201ENST00000425106 1187 ntBASIC7.27□□□□□ -1.25
TOP2AP11388 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TOP2AP11388 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC7.27□□□□□ -1.25
TOP2AP11388 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC7.27□□□□□ -1.25
TOP2AP11388 AC110743.1-201ENST00000584870 478 ntBASIC7.27□□□□□ -1.25
TOP2AP11388 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC7.27□□□□□ -1.25
TOP2AP11388 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC7.27□□□□□ -1.25
TOP2AP11388 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC7.27□□□□□ -1.25
TOP2AP11388 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TOP2AP11388 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.27□□□□□ -1.25
TOP2AP11388 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC7.27□□□□□ -1.25
TOP2AP11388 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC7.27□□□□□ -1.25
TOP2AP11388 YME1L1P1-201ENST00000429435 297 ntBASIC7.27□□□□□ -1.25
TOP2AP11388 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC7.27□□□□□ -1.25
TOP2AP11388 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC7.27□□□□□ -1.25
TOP2AP11388 AC010480.1-201ENST00000624823 684 ntBASIC7.27□□□□□ -1.25
TOP2AP11388 AL731532.2-201ENST00000623542 1953 ntBASIC7.26□□□□□ -1.25
TOP2AP11388 AC006971.1-201ENST00000407916 4486 ntBASIC7.26□□□□□ -1.25
TOP2AP11388 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.25
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms