Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC007342.7-201ENST00000624610 2337 ntBASIC3.37□□□□□ -1.87
CXCL1P09341 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.37□□□□□ -1.87
CXCL1P09341 AC134882.1-201ENST00000603738 1676 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 CYP1D1P-201ENST00000416662 1433 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCL1P09341 Z73965.1-201ENST00000623412 2297 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CXCL1P09341 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
CXCL1P09341 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.36□□□□□ -1.87
CXCL1P09341 CPHL1P-201ENST00000461341 3407 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCL1P09341 MIR323A-201ENST00000362199 86 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 RN7SKP162-201ENST00000363605 345 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 AC093719.1-202ENST00000392735 373 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCL1P09341 AP000357.1-201ENST00000409926 1165 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 LINC01349-201ENST00000416343 497 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCL1P09341 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC3.36□□□□□ -1.87
CXCL1P09341 AC115285.1-201ENST00000424879 736 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 RPS26P47-201ENST00000427219 348 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCL1P09341 COPS8P2-201ENST00000473228 627 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 AC090114.3-201ENST00000479267 829 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 RPL36AP41-201ENST00000493820 306 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 AC108145.1-201ENST00000503770 153 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CXCL1P09341 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCL1P09341 AC004980.4-201ENST00000513375 203 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCL1P09341 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCL1P09341 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.36□□□□□ -1.87
CXCL1P09341 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.36□□□□□ -1.87
CXCL1P09341 AC004825.1-201ENST00000555068 586 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCL1P09341 AC009101.1-201ENST00000568135 242 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 SNORD95-201ENST00000579879 68 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.36□□□□□ -1.87
CXCL1P09341 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC3.36□□□□□ -1.87
CXCL1P09341 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC3.36□□□□□ -1.87
CXCL1P09341 BPIFA4P-203ENST00000603168 689 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCL1P09341 U7.8-201ENST00000619968 63 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC3.36□□□□□ -1.87
CXCL1P09341 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CXCL1P09341 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CXCL1P09341 MARK2P15-201ENST00000432204 2186 ntBASIC3.36□□□□□ -1.87
CXCL1P09341 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCL1P09341 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CXCL1P09341 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.36□□□□□ -1.87
CXCL1P09341 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CXCL1P09341 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC3.36□□□□□ -1.87
CXCL1P09341 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.35□□□□□ -1.87
CXCL1P09341 NCAPGP1-201ENST00000505112 1814 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 BX005019.1-201ENST00000561881 1810 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL1P09341 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL1P09341 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC3.35□□□□□ -1.87
CXCL1P09341 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.35□□□□□ -1.87
CXCL1P09341 TAS2R8-201ENST00000240615 1243 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CXCL1P09341 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CXCL1P09341 MIR223-201ENST00000385204 110 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCL1P09341 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCL1P09341 AL158073.1-201ENST00000426848 1104 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCL1P09341 BMS1P19-201ENST00000433925 393 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.35□□□□□ -1.87
CXCL1P09341 CYCSP11-201ENST00000436426 315 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.35□□□□□ -1.87
CXCL1P09341 EIF4A1P11-201ENST00000451239 222 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC3.35□□□□□ -1.87
CXCL1P09341 BTF3L4P4-201ENST00000506381 449 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC3.35□□□□□ -1.87
CXCL1P09341 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCL1P09341 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC3.35□□□□□ -1.87
CXCL1P09341 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.35□□□□□ -1.87
CXCL1P09341 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC3.35□□□□□ -1.87
CXCL1P09341 AC135001.1-201ENST00000544546 283 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 MTND2P17-201ENST00000550281 688 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 AC068446.3-201ENST00000555285 382 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.35□□□□□ -1.87
CXCL1P09341 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC3.35□□□□□ -1.87
CXCL1P09341 MIR3614-201ENST00000581261 86 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
CXCL1P09341 AC064801.1-201ENST00000612025 407 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 EIF3FP1-201ENST00000613970 806 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.35□□□□□ -1.87
CXCL1P09341 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
CXCL1P09341 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC3.35□□□□□ -1.87
CXCL1P09341 LINC01739-205ENST00000641890 573 ntBASIC3.35□□□□□ -1.87
CXCL1P09341 OR2J3-201ENST00000377169 1325 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
CXCL1P09341 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
CXCL1P09341 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.34□□□□□ -1.87
CXCL1P09341 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
CXCL1P09341 LINC00622-201ENST00000562811 1570 ntBASIC3.34□□□□□ -1.87
CXCL1P09341 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.34□□□□□ -1.87
CXCL1P09341 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
CXCL1P09341 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
CXCL1P09341 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC3.34□□□□□ -1.87
CXCL1P09341 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms