Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RB1P06400 AC108751.5-201ENST00000492880 1336 ntBASIC5.21□□□□□ -1.58
RB1P06400 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
RB1P06400 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RB1P06400 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RB1P06400 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RB1P06400 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
RB1P06400 FAM3C2-201ENST00000312214 681 ntBASIC5.2□□□□□ -1.58
RB1P06400 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.2□□□□□ -1.58
RB1P06400 IGKV7-3-201ENST00000357453 298 ntBASIC5.2□□□□□ -1.58
RB1P06400 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RB1P06400 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
RB1P06400 MIR1193-201ENST00000408109 78 ntBASIC5.2□□□□□ -1.58
RB1P06400 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.2□□□□□ -1.58
RB1P06400 RN7SKP27-201ENST00000410684 333 ntBASIC5.2□□□□□ -1.58
RB1P06400 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.2□□□□□ -1.58
RB1P06400 AC010385.1-201ENST00000412374 256 ntBASIC5.2□□□□□ -1.58
RB1P06400 OR6C64P-201ENST00000419708 825 ntBASIC5.2□□□□□ -1.58
RB1P06400 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.2□□□□□ -1.58
RB1P06400 AL360093.1-201ENST00000420237 1126 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RB1P06400 AC012519.1-201ENST00000424588 610 ntBASIC5.2□□□□□ -1.58
RB1P06400 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC5.2□□□□□ -1.58
RB1P06400 AL512661.1-201ENST00000434586 1253 ntBASIC5.2□□□□□ -1.58
RB1P06400 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC5.2□□□□□ -1.58
RB1P06400 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.2□□□□□ -1.58
RB1P06400 AL450023.3-201ENST00000440592 271 ntBASIC5.2□□□□□ -1.58
RB1P06400 TXNP5-201ENST00000441043 315 ntBASIC5.2□□□□□ -1.58
RB1P06400 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC5.2□□□□□ -1.58
RB1P06400 AC022431.1-201ENST00000450941 438 ntBASIC5.2□□□□□ -1.58
RB1P06400 NUTF2P7-201ENST00000453086 375 ntBASIC5.2□□□□□ -1.58
RB1P06400 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
RB1P06400 AC104971.1-201ENST00000495117 578 ntBASIC5.2□□□□□ -1.58
RB1P06400 RPSAP51-201ENST00000497462 645 ntBASIC5.2□□□□□ -1.58
RB1P06400 LINC00603-201ENST00000507027 733 ntTSL 5 BASIC5.2□□□□□ -1.58
RB1P06400 AC021193.1-201ENST00000511607 420 ntBASIC5.2□□□□□ -1.58
RB1P06400 HMGN1P15-201ENST00000513870 295 ntBASIC5.2□□□□□ -1.58
RB1P06400 AC112206.4-201ENST00000515142 405 ntBASIC5.2□□□□□ -1.58
RB1P06400 RNA5SP464-201ENST00000516251 108 ntBASIC5.2□□□□□ -1.58
RB1P06400 AC068413.1-201ENST00000517739 776 ntTSL 5 BASIC5.2□□□□□ -1.58
RB1P06400 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.2□□□□□ -1.58
RB1P06400 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC5.2□□□□□ -1.58
RB1P06400 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.2□□□□□ -1.58
RB1P06400 DPRXP4-201ENST00000578053 568 ntBASIC5.2□□□□□ -1.58
RB1P06400 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC5.2□□□□□ -1.58
RB1P06400 AC103792.1-201ENST00000603591 919 ntBASIC5.2□□□□□ -1.58
RB1P06400 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC5.2□□□□□ -1.58
RB1P06400 MIR6716-201ENST00000613413 80 ntBASIC5.2□□□□□ -1.58
RB1P06400 AL121873.1-201ENST00000616013 524 ntBASIC5.2□□□□□ -1.58
RB1P06400 AC095038.2-201ENST00000621464 1070 ntBASIC5.2□□□□□ -1.58
RB1P06400 AC068724.3-201ENST00000625906 87 ntBASIC5.2□□□□□ -1.58
RB1P06400 AP000756.2-201ENST00000624168 2567 ntBASIC5.2□□□□□ -1.58
RB1P06400 AC025574.1-201ENST00000554784 1653 ntBASIC5.2□□□□□ -1.58
RB1P06400 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
RB1P06400 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.2□□□□□ -1.58
RB1P06400 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.2□□□□□ -1.58
RB1P06400 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC5.2□□□□□ -1.58
RB1P06400 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
RB1P06400 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RB1P06400 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RB1P06400 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RB1P06400 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC5.19□□□□□ -1.58
RB1P06400 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
RB1P06400 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
RB1P06400 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RB1P06400 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
RB1P06400 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
RB1P06400 RNA5SP241-201ENST00000391326 114 ntBASIC5.19□□□□□ -1.58
RB1P06400 RNU4-25P-201ENST00000410569 230 ntBASIC5.19□□□□□ -1.58
RB1P06400 RNA5SP345-201ENST00000410646 108 ntBASIC5.19□□□□□ -1.58
RB1P06400 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.19□□□□□ -1.58
RB1P06400 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.19□□□□□ -1.58
RB1P06400 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC5.19□□□□□ -1.58
RB1P06400 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC5.19□□□□□ -1.58
RB1P06400 CLIC4P1-201ENST00000453177 535 ntBASIC5.19□□□□□ -1.58
RB1P06400 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.19□□□□□ -1.58
RB1P06400 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC5.19□□□□□ -1.58
RB1P06400 SNORA31.13-201ENST00000516624 135 ntBASIC5.19□□□□□ -1.58
RB1P06400 CIR1P1-201ENST00000524055 1133 ntBASIC5.19□□□□□ -1.58
RB1P06400 AC008083.2-201ENST00000546707 476 ntBASIC5.19□□□□□ -1.58
RB1P06400 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC5.19□□□□□ -1.58
RB1P06400 AC027216.1-201ENST00000577726 685 ntBASIC5.19□□□□□ -1.58
RB1P06400 TTN-AS1-232ENST00000589487 1077 ntTSL 5 BASIC5.19□□□□□ -1.58
RB1P06400 AC096553.1-201ENST00000605169 829 ntBASIC5.19□□□□□ -1.58
RB1P06400 AC023813.4-201ENST00000607580 580 ntBASIC5.19□□□□□ -1.58
RB1P06400 MIR8084-201ENST00000614105 89 ntBASIC5.19□□□□□ -1.58
RB1P06400 AC108359.1-201ENST00000616451 1211 ntBASIC5.19□□□□□ -1.58
RB1P06400 AP002967.1-201ENST00000624203 539 ntBASIC5.19□□□□□ -1.58
RB1P06400 AL355306.2-208ENST00000634868 1251 ntTSL 5 BASIC5.19□□□□□ -1.58
RB1P06400 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
RB1P06400 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
RB1P06400 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC5.19□□□□□ -1.58
RB1P06400 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
RB1P06400 AC002525.1-201ENST00000624392 1622 ntBASIC5.19□□□□□ -1.58
RB1P06400 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.19□□□□□ -1.58
RB1P06400 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.19□□□□□ -1.58
RB1P06400 MAPK10-328ENST00000641553 4009 ntBASIC5.19□□□□□ -1.58
RB1P06400 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
RB1P06400 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.18□□□□□ -1.58
RB1P06400 MTND5P11-201ENST00000511037 1812 ntBASIC5.18□□□□□ -1.58
RB1P06400 AC009951.1-201ENST00000623674 2614 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.6 ms