Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.67□□□□□ -1.66
APOEP02649 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
APOEP02649 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
APOEP02649 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
APOEP02649 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
APOEP02649 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
APOEP02649 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
APOEP02649 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
APOEP02649 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
APOEP02649 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
APOEP02649 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.66□□□□□ -1.66
APOEP02649 NAMPTP1-201ENST00000440465 2514 ntBASIC4.66□□□□□ -1.66
APOEP02649 IGKV7-3-201ENST00000357453 298 ntBASIC4.66□□□□□ -1.66
APOEP02649 RNA5SP151-201ENST00000365632 117 ntBASIC4.66□□□□□ -1.66
APOEP02649 SRY-201ENST00000383070 845 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
APOEP02649 RN7SKP216-201ENST00000411050 312 ntBASIC4.66□□□□□ -1.66
APOEP02649 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC4.66□□□□□ -1.66
APOEP02649 RPS27AP7-201ENST00000422792 455 ntBASIC4.66□□□□□ -1.66
APOEP02649 NPM1P26-201ENST00000426339 738 ntBASIC4.66□□□□□ -1.66
APOEP02649 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC4.66□□□□□ -1.66
APOEP02649 AC069285.2-201ENST00000440210 275 ntBASIC4.66□□□□□ -1.66
APOEP02649 SNRPFP2-201ENST00000440710 251 ntBASIC4.66□□□□□ -1.66
APOEP02649 RPL23AP43-201ENST00000446445 471 ntBASIC4.66□□□□□ -1.66
APOEP02649 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.66□□□□□ -1.66
APOEP02649 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.66□□□□□ -1.66
APOEP02649 Z95152.1-201ENST00000453556 656 ntBASIC4.66□□□□□ -1.66
APOEP02649 AC239798.3-201ENST00000454459 408 ntBASIC4.66□□□□□ -1.66
APOEP02649 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC4.66□□□□□ -1.66
APOEP02649 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.66□□□□□ -1.66
APOEP02649 AC098583.1-201ENST00000480875 255 ntBASIC4.66□□□□□ -1.66
APOEP02649 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC4.66□□□□□ -1.66
APOEP02649 RNA5SP497-201ENST00000516081 97 ntBASIC4.66□□□□□ -1.66
APOEP02649 IGLVIV-65-201ENST00000517313 360 ntBASIC4.66□□□□□ -1.66
APOEP02649 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC4.66□□□□□ -1.66
APOEP02649 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.66□□□□□ -1.66
APOEP02649 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.66□□□□□ -1.66
APOEP02649 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.66□□□□□ -1.66
APOEP02649 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
APOEP02649 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.66□□□□□ -1.66
APOEP02649 AC020634.1-201ENST00000608701 549 ntBASIC4.66□□□□□ -1.66
APOEP02649 AC091905.2-201ENST00000623143 306 ntBASIC4.66□□□□□ -1.66
APOEP02649 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC4.66□□□□□ -1.66
APOEP02649 BMS1P21-201ENST00000634565 365 ntBASIC4.66□□□□□ -1.66
APOEP02649 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
APOEP02649 AC025031.4-201ENST00000621248 3271 ntBASIC4.66□□□□□ -1.66
APOEP02649 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
APOEP02649 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
APOEP02649 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
APOEP02649 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
APOEP02649 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
APOEP02649 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.65□□□□□ -1.66
APOEP02649 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.65□□□□□ -1.66
APOEP02649 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
APOEP02649 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.65□□□□□ -1.66
APOEP02649 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.66
APOEP02649 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
APOEP02649 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.65□□□□□ -1.66
APOEP02649 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
APOEP02649 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
APOEP02649 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
APOEP02649 RNU6-984P-201ENST00000363236 109 ntBASIC4.65□□□□□ -1.67
APOEP02649 RNA5SP447-201ENST00000363749 119 ntBASIC4.65□□□□□ -1.67
APOEP02649 RNU1-32P-201ENST00000363937 159 ntBASIC4.65□□□□□ -1.67
APOEP02649 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.65□□□□□ -1.67
APOEP02649 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
APOEP02649 RPL23AP48-201ENST00000406913 488 ntBASIC4.65□□□□□ -1.67
APOEP02649 AL160275.2-201ENST00000412010 394 ntBASIC4.65□□□□□ -1.67
APOEP02649 AL356387.2-201ENST00000422272 243 ntBASIC4.65□□□□□ -1.67
APOEP02649 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC4.65□□□□□ -1.67
APOEP02649 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.65□□□□□ -1.67
APOEP02649 H2AFZP6-201ENST00000444403 394 ntBASIC4.65□□□□□ -1.67
APOEP02649 CYCSP42-201ENST00000450823 238 ntBASIC4.65□□□□□ -1.67
APOEP02649 VN1R32P-201ENST00000452234 905 ntBASIC4.65□□□□□ -1.67
APOEP02649 EIF4A2P4-201ENST00000458691 1196 ntBASIC4.65□□□□□ -1.67
APOEP02649 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.65□□□□□ -1.67
APOEP02649 RPS27AP17-201ENST00000463344 455 ntBASIC4.65□□□□□ -1.67
APOEP02649 AC107015.1-201ENST00000466902 747 ntBASIC4.65□□□□□ -1.67
APOEP02649 AC013356.1-201ENST00000489027 564 ntBASIC4.65□□□□□ -1.67
APOEP02649 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC4.65□□□□□ -1.67
APOEP02649 STMN1P2-201ENST00000508435 439 ntBASIC4.65□□□□□ -1.67
APOEP02649 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.65□□□□□ -1.67
APOEP02649 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC4.65□□□□□ -1.67
APOEP02649 AC090151.1-201ENST00000520784 730 ntBASIC4.65□□□□□ -1.67
APOEP02649 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.65□□□□□ -1.67
APOEP02649 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC4.65□□□□□ -1.67
APOEP02649 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
APOEP02649 AP001160.4-201ENST00000596971 382 ntBASIC4.65□□□□□ -1.67
APOEP02649 AC103792.1-201ENST00000603591 919 ntBASIC4.65□□□□□ -1.67
APOEP02649 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC4.65□□□□□ -1.67
APOEP02649 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.65□□□□□ -1.67
APOEP02649 AL353726.1-201ENST00000614041 1000 ntBASIC4.65□□□□□ -1.67
APOEP02649 AL035461.2-201ENST00000619201 524 ntBASIC4.65□□□□□ -1.67
APOEP02649 AL356121.2-201ENST00000624715 780 ntBASIC4.65□□□□□ -1.67
APOEP02649 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
APOEP02649 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC4.65□□□□□ -1.67
APOEP02649 NXPH1-205ENST00000602349 1953 ntBASIC4.65□□□□□ -1.67
APOEP02649 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
APOEP02649 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.65□□□□□ -1.67
APOEP02649 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC4.65□□□□□ -1.67
APOEP02649 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC4.65□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 76.1 ms