Protein–RNA interactions for Protein: P01909

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1P01909 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC021146.7-201ENST00000509604 775 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 FABP5P6-201ENST00000510588 409 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 SCARNA21.2-201ENST00000516600 166 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 snoU109.6-201ENST00000516831 118 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC093249.4-201ENST00000564755 259 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 MIR4489-201ENST00000578869 62 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 ZNF561-AS1-207ENST00000591932 676 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AP002360.3-201ENST00000607673 710 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC020658.4-201ENST00000613987 684 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 LINC00216-201ENST00000623548 1126 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 RPL23AP61-201ENST00000623642 466 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 AC104820.1-201ENST00000624183 307 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 CASC19-222ENST00000641321 1173 ntBASIC3.44□□□□□ -1.86
HLA-DQA1P01909 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
HLA-DQA1P01909 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 SNORA51.1-201ENST00000363243 140 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 RN7SKP269-201ENST00000365545 319 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 RNA5SP151-201ENST00000365632 117 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AL590762.2-201ENST00000395798 571 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 DPPA2P3-201ENST00000411853 655 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 GJA6P-201ENST00000415117 1042 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 BTF3P9-201ENST00000418784 283 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC234779.1-201ENST00000425910 285 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 TMEM196-204ENST00000433641 768 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 LINC01431-201ENST00000442440 514 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 NDUFA5P8-201ENST00000449019 346 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AP002345.1-201ENST00000456493 928 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC024558.1-201ENST00000505008 528 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 ACTR6P1-201ENST00000514311 1104 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 MAL2-208ENST00000523307 556 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 TEX49-202ENST00000548380 573 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC068020.1-201ENST00000594215 661 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC020914.4-201ENST00000597690 277 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC023762.1-201ENST00000603280 584 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 SUMO2P15-201ENST00000604285 278 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC084036.1-201ENST00000609190 508 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC022467.1-201ENST00000614738 749 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC009032.1-201ENST00000617574 431 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 AL031985.3-201ENST00000565390 2449 ntBASIC3.43□□□□□ -1.86
HLA-DQA1P01909 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.43□□□□□ -1.86
HLA-DQA1P01909 ZNF733P-202ENST00000444809 1573 ntBASIC3.42□□□□□ -1.86
HLA-DQA1P01909 CYP3A43-203ENST00000342499 1396 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC3.42□□□□□ -1.86
HLA-DQA1P01909 AC132825.1-201ENST00000463573 2247 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms