Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC4.83□□□□□ -1.64
PDGFBP01127 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFBP01127 OR8Q1P-201ENST00000526467 655 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFBP01127 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFBP01127 RN7SL176P-201ENST00000580352 264 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC4.83□□□□□ -1.64
PDGFBP01127 ELOCP34-201ENST00000604436 327 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFBP01127 AC116447.1-201ENST00000613153 453 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AL118556.2-201ENST00000614375 824 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AL133243.1-201ENST00000614487 366 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AC015712.7-201ENST00000615211 635 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AP005019.3-201ENST00000620418 560 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 AC004777.1-201ENST00000624317 287 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 OR5AC4P-202ENST00000642086 985 ntBASIC4.83□□□□□ -1.64
PDGFBP01127 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.83□□□□□ -1.64
PDGFBP01127 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.83□□□□□ -1.64
PDGFBP01127 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PDGFBP01127 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
PDGFBP01127 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFBP01127 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.83□□□□□ -1.64
PDGFBP01127 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFBP01127 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
PDGFBP01127 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC4.82□□□□□ -1.64
PDGFBP01127 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PDGFBP01127 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFBP01127 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PDGFBP01127 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC4.82□□□□□ -1.64
PDGFBP01127 AC008758.3-201ENST00000507003 1829 ntBASIC4.82□□□□□ -1.64
PDGFBP01127 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFBP01127 MIR421-201ENST00000365696 85 ntBASIC4.82□□□□□ -1.64
PDGFBP01127 RNU6-31P-201ENST00000384388 108 ntBASIC4.82□□□□□ -1.64
PDGFBP01127 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
PDGFBP01127 AL035079.1-201ENST00000405210 287 ntBASIC4.82□□□□□ -1.64
PDGFBP01127 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFBP01127 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.82□□□□□ -1.64
PDGFBP01127 RN7SL132P-201ENST00000478131 296 ntBASIC4.82□□□□□ -1.64
PDGFBP01127 RPS27AP16-201ENST00000492222 470 ntBASIC4.82□□□□□ -1.64
PDGFBP01127 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFBP01127 AC015795.1-201ENST00000513669 327 ntBASIC4.82□□□□□ -1.64
PDGFBP01127 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC4.82□□□□□ -1.64
PDGFBP01127 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFBP01127 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC4.82□□□□□ -1.64
PDGFBP01127 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC4.82□□□□□ -1.64
PDGFBP01127 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFBP01127 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFBP01127 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.82□□□□□ -1.64
PDGFBP01127 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.82□□□□□ -1.64
PDGFBP01127 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.82□□□□□ -1.64
PDGFBP01127 AL133338.2-201ENST00000604292 736 ntBASIC4.82□□□□□ -1.64
PDGFBP01127 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.82□□□□□ -1.64
PDGFBP01127 AP003497.2-201ENST00000624220 967 ntBASIC4.82□□□□□ -1.64
PDGFBP01127 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFBP01127 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC4.82□□□□□ -1.64
PDGFBP01127 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
PDGFBP01127 ABCC13-202ENST00000463099 3842 ntBASIC4.82□□□□□ -1.64
PDGFBP01127 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
PDGFBP01127 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
PDGFBP01127 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC4.81□□□□□ -1.64
PDGFBP01127 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
PDGFBP01127 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.81□□□□□ -1.64
PDGFBP01127 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
PDGFBP01127 SPRR2C-201ENST00000290702 219 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 MIR659-201ENST00000384963 97 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 RN7SKP202-201ENST00000410439 330 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 AC011933.1-201ENST00000413334 321 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 AL158827.1-201ENST00000416300 391 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 AC048351.1-201ENST00000420064 602 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
PDGFBP01127 AC245517.2-201ENST00000442890 346 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC4.81□□□□□ -1.64
PDGFBP01127 RNU6-1218P-201ENST00000458990 108 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 RNU7-27P-201ENST00000459281 62 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 AC116533.1-201ENST00000459748 321 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 AC005412.2-201ENST00000492004 341 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC4.81□□□□□ -1.64
PDGFBP01127 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC4.81□□□□□ -1.64
PDGFBP01127 LINC00500-201ENST00000515860 539 ntTSL 4 BASIC4.81□□□□□ -1.64
PDGFBP01127 IGKV2-23-201ENST00000518729 323 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC4.81□□□□□ -1.64
PDGFBP01127 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.81□□□□□ -1.64
PDGFBP01127 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.81□□□□□ -1.64
PDGFBP01127 PSMB7P1-201ENST00000556349 514 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.81□□□□□ -1.64
PDGFBP01127 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.81□□□□□ -1.64
PDGFBP01127 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC4.81□□□□□ -1.64
PDGFBP01127 AC010503.3-201ENST00000594355 540 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 AL121932.1-201ENST00000605542 214 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 AC073111.2-201ENST00000605657 1075 ntBASIC4.81□□□□□ -1.64
PDGFBP01127 AC091979.2-201ENST00000607514 214 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 87.8 ms