Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC4.59□□□□□ -1.67
CLPTM1O96005 OR8X1P-201ENST00000534542 869 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CLPTM1O96005 YWHABP2-201ENST00000540201 713 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 ASB8-215ENST00000540782 659 ntTSL 3 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC090017.1-201ENST00000548612 1779 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC4.59□□□□□ -1.67
CLPTM1O96005 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC087477.6-201ENST00000559595 843 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC4.59□□□□□ -1.67
CLPTM1O96005 MIR762HG-201ENST00000564901 648 ntTSL 2 BASIC4.59□□□□□ -1.67
CLPTM1O96005 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC4.59□□□□□ -1.67
CLPTM1O96005 BMS1P7-201ENST00000602440 1052 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 AC068620.3-201ENST00000602749 560 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 SUMO2P15-201ENST00000604285 278 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 AL512329.2-201ENST00000607350 548 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 AC005021.1-201ENST00000608730 355 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CLPTM1O96005 AL050303.3-201ENST00000613704 284 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 WWOX-217ENST00000620008 450 ntTSL 2 BASIC4.59□□□□□ -1.67
CLPTM1O96005 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC068880.4-201ENST00000623082 495 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.59□□□□□ -1.67
CLPTM1O96005 AC004808.1-201ENST00000627671 721 ntBASIC4.59□□□□□ -1.67
CLPTM1O96005 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.68
CLPTM1O96005 AC068254.2-201ENST00000623938 3577 ntBASIC4.59□□□□□ -1.68
CLPTM1O96005 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.59□□□□□ -1.68
CLPTM1O96005 AP000756.2-201ENST00000624168 2567 ntBASIC4.59□□□□□ -1.68
CLPTM1O96005 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLPTM1O96005 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLPTM1O96005 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.58□□□□□ -1.68
CLPTM1O96005 PABPC1P6-201ENST00000445594 1829 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CLPTM1O96005 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLPTM1O96005 AC011493.1-201ENST00000596753 1632 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLPTM1O96005 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.58□□□□□ -1.68
CLPTM1O96005 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
CLPTM1O96005 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLPTM1O96005 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLPTM1O96005 MTCO1P4-201ENST00000520516 1409 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 LINC01317-201ENST00000366209 779 ntTSL 5 BASIC4.58□□□□□ -1.68
CLPTM1O96005 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLPTM1O96005 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLPTM1O96005 MIR105-1-201ENST00000385222 81 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 RNU6-1000P-201ENST00000391066 106 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CLPTM1O96005 U3.35-201ENST00000408405 208 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC4.58□□□□□ -1.68
CLPTM1O96005 AP000534.2-201ENST00000412729 568 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AL024507.1-201ENST00000412741 274 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC4.58□□□□□ -1.68
CLPTM1O96005 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC4.58□□□□□ -1.68
CLPTM1O96005 AC092162.1-201ENST00000432828 434 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC4.58□□□□□ -1.68
CLPTM1O96005 RPL12P46-201ENST00000436610 195 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.58□□□□□ -1.68
CLPTM1O96005 AC004938.1-201ENST00000438468 308 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AC073052.1-201ENST00000440417 714 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 TXNP5-201ENST00000441043 315 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.58□□□□□ -1.68
CLPTM1O96005 RPL23AP23-201ENST00000452590 471 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 RPS26P28-201ENST00000470806 348 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC4.58□□□□□ -1.68
CLPTM1O96005 RPS21P4-201ENST00000487122 248 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 RPS4XP14-201ENST00000493072 781 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLPTM1O96005 RNA5SP373-201ENST00000517271 95 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC4.58□□□□□ -1.68
CLPTM1O96005 LECT2-205ENST00000522943 574 ntTSL 3 BASIC4.58□□□□□ -1.68
CLPTM1O96005 AC090819.1-201ENST00000523800 1111 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.58□□□□□ -1.68
CLPTM1O96005 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLPTM1O96005 AC004825.1-201ENST00000555068 586 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.58□□□□□ -1.68
CLPTM1O96005 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC4.58□□□□□ -1.68
CLPTM1O96005 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.58□□□□□ -1.68
CLPTM1O96005 AL158211.1-201ENST00000566763 763 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CLPTM1O96005 AL121834.1-201ENST00000572284 509 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.58□□□□□ -1.68
CLPTM1O96005 AP004372.1-201ENST00000604842 844 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AC090912.3-201ENST00000609775 533 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC4.58□□□□□ -1.68
CLPTM1O96005 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC4.58□□□□□ -1.68
CLPTM1O96005 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.58□□□□□ -1.68
CLPTM1O96005 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC4.58□□□□□ -1.68
CLPTM1O96005 AP002505.2-201ENST00000623585 696 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AC090506.2-201ENST00000624521 419 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AP003485.1-201ENST00000625093 753 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 OR4G3P-201ENST00000633500 913 ntBASIC4.58□□□□□ -1.68
CLPTM1O96005 AC074101.1-201ENST00000637861 241 ntBASIC4.58□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 171.6 ms