Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.38□□□□□ -1.71
CLDN9O95484 AC008759.1-201ENST00000589783 983 ntBASIC4.38□□□□□ -1.71
CLDN9O95484 AC026979.4-201ENST00000606555 645 ntBASIC4.38□□□□□ -1.71
CLDN9O95484 AP002360.3-201ENST00000607673 710 ntBASIC4.38□□□□□ -1.71
CLDN9O95484 FAM25E-202ENST00000608562 189 ntBASIC4.38□□□□□ -1.71
CLDN9O95484 AC145207.9-201ENST00000623802 325 ntBASIC4.38□□□□□ -1.71
CLDN9O95484 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.38□□□□□ -1.71
CLDN9O95484 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.38□□□□□ -1.71
CLDN9O95484 LINC00622-201ENST00000562811 1570 ntBASIC4.38□□□□□ -1.71
CLDN9O95484 OR51H2P-202ENST00000641424 3046 ntBASIC4.38□□□□□ -1.71
CLDN9O95484 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN9O95484 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN9O95484 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.38□□□□□ -1.71
CLDN9O95484 AC139769.1-204ENST00000472297 1931 ntBASIC4.38□□□□□ -1.71
CLDN9O95484 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN9O95484 AC007342.9-201ENST00000623877 1385 ntBASIC4.38□□□□□ -1.71
CLDN9O95484 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
CLDN9O95484 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLDN9O95484 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN9O95484 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN9O95484 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.37□□□□□ -1.71
CLDN9O95484 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN9O95484 CASC19-284ENST00000642142 1868 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN9O95484 CPHL1P-201ENST00000461341 3407 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLDN9O95484 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.37□□□□□ -1.71
CLDN9O95484 RNU1-44P-201ENST00000384453 163 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 SNORA68.2-201ENST00000391263 128 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN9O95484 AC009302.1-201ENST00000417147 390 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN9O95484 AL772161.1-201ENST00000439130 476 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN9O95484 RPL21P133-201ENST00000443666 476 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 AC099063.2-201ENST00000446360 662 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 VN1R48P-201ENST00000448149 1036 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN9O95484 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN9O95484 AC092324.1-201ENST00000468671 324 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 AC090013.1-201ENST00000485147 480 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.37□□□□□ -1.71
CLDN9O95484 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN9O95484 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN9O95484 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN9O95484 LINC02382-201ENST00000515840 614 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN9O95484 SNORA70.17-201ENST00000516449 133 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 IGKV1-32-201ENST00000519290 311 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 OR7E10P-201ENST00000526420 991 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC4.37□□□□□ -1.71
CLDN9O95484 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.37□□□□□ -1.71
CLDN9O95484 MIR4480-201ENST00000582492 71 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN9O95484 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC4.37□□□□□ -1.71
CLDN9O95484 AC090181.2-201ENST00000602975 672 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 AL353726.1-201ENST00000614041 1000 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN9O95484 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN9O95484 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.37□□□□□ -1.71
CLDN9O95484 OR14L1P-202ENST00000641545 3009 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
CLDN9O95484 AP001273.1-201ENST00000624493 3152 ntBASIC4.37□□□□□ -1.71
CLDN9O95484 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN9O95484 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN9O95484 AC027290.2-201ENST00000623210 18662 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN9O95484 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN9O95484 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN9O95484 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN9O95484 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLDN9O95484 RNA5SP22-201ENST00000365393 109 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.36□□□□□ -1.71
CLDN9O95484 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC4.36□□□□□ -1.71
CLDN9O95484 OR51I1-201ENST00000380211 945 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
CLDN9O95484 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN9O95484 RNU2-50P-201ENST00000410494 143 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 RPL37P18-201ENST00000411602 243 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN9O95484 AL139128.1-201ENST00000413921 941 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 PDSS1P1-201ENST00000422953 1114 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 CENPIP1-201ENST00000425713 902 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 RPS12P10-201ENST00000427031 377 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
CLDN9O95484 YWHAZP2-201ENST00000440317 728 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 RPL23AP93-201ENST00000440847 484 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.36□□□□□ -1.71
CLDN9O95484 RPS27AP15-201ENST00000447672 466 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN9O95484 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN9O95484 AC012671.1-201ENST00000451912 203 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 VN1R32P-201ENST00000452234 905 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 AC092905.1-201ENST00000467527 949 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN9O95484 OR7H2P-201ENST00000513483 306 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 AC097460.1-204ENST00000515026 764 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN9O95484 OR5M2P-201ENST00000529003 936 ntBASIC4.36□□□□□ -1.71
CLDN9O95484 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC4.36□□□□□ -1.71
CLDN9O95484 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC4.36□□□□□ -1.71
CLDN9O95484 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.36□□□□□ -1.71
CLDN9O95484 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms