Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
ZIC3O60481 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.6□□□□□ -1.67
ZIC3O60481 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
ZIC3O60481 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC4.6□□□□□ -1.67
ZIC3O60481 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 MUM1L1-202ENST00000357175 4173 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
ZIC3O60481 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
ZIC3O60481 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC4.6□□□□□ -1.67
ZIC3O60481 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 SNORA74A-201ENST00000364089 198 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 RNA5SP455-201ENST00000365190 119 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 SNRPE-201ENST00000367208 355 ntTSL 2 BASIC4.6□□□□□ -1.67
ZIC3O60481 SNORA2.3-201ENST00000383920 135 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ZIC3O60481 RNU6-1242P-201ENST00000391052 103 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 AL078599.1-201ENST00000402075 293 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC4.6□□□□□ -1.67
ZIC3O60481 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 AC084290.1-201ENST00000434995 374 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 RHOT1P3-201ENST00000436571 331 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 AC073052.1-201ENST00000440417 714 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 Z77249.1-201ENST00000444622 1175 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 MTCYBP42-201ENST00000444653 1130 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 AC068135.1-201ENST00000446164 246 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 AL035551.1-201ENST00000446931 348 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 RPS6P2-201ENST00000454208 705 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 RNU7-27P-201ENST00000459281 62 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC4.6□□□□□ -1.67
ZIC3O60481 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.6□□□□□ -1.67
ZIC3O60481 AC091860.1-201ENST00000505723 432 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC4.6□□□□□ -1.67
ZIC3O60481 COX6B1P5-201ENST00000509843 249 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC4.6□□□□□ -1.67
ZIC3O60481 AC110775.1-201ENST00000513721 462 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 AC020937.1-201ENST00000519677 1013 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 IGKV2D-10-201ENST00000520194 281 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC4.6□□□□□ -1.67
ZIC3O60481 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC4.6□□□□□ -1.67
ZIC3O60481 AC125612.1-201ENST00000547580 377 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC4.6□□□□□ -1.67
ZIC3O60481 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.6□□□□□ -1.67
ZIC3O60481 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC4.6□□□□□ -1.67
ZIC3O60481 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.6□□□□□ -1.67
ZIC3O60481 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.6□□□□□ -1.67
ZIC3O60481 MIR4691-201ENST00000583764 85 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 ZNF92P3-201ENST00000596594 954 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.6□□□□□ -1.67
ZIC3O60481 AC107952.2-201ENST00000606048 486 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC4.6□□□□□ -1.67
ZIC3O60481 AC021755.4-201ENST00000616620 456 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.6□□□□□ -1.67
ZIC3O60481 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC4.6□□□□□ -1.67
ZIC3O60481 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ZIC3O60481 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
ZIC3O60481 EEF1A1P36-201ENST00000427807 1351 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.6□□□□□ -1.67
ZIC3O60481 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC4.6□□□□□ -1.67
ZIC3O60481 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC4.6□□□□□ -1.67
ZIC3O60481 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
ZIC3O60481 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
ZIC3O60481 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC4.6□□□□□ -1.67
ZIC3O60481 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.6□□□□□ -1.67
ZIC3O60481 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
ZIC3O60481 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC4.59□□□□□ -1.67
ZIC3O60481 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZIC3O60481 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC4.59□□□□□ -1.67
ZIC3O60481 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZIC3O60481 RNU1-87P-201ENST00000363727 170 ntBASIC4.59□□□□□ -1.67
ZIC3O60481 SNORA62.2-201ENST00000364672 152 ntBASIC4.59□□□□□ -1.67
ZIC3O60481 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.59□□□□□ -1.67
ZIC3O60481 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
ZIC3O60481 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZIC3O60481 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZIC3O60481 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
ZIC3O60481 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZIC3O60481 MTND4P13-201ENST00000402078 1023 ntBASIC4.59□□□□□ -1.67
ZIC3O60481 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.59□□□□□ -1.67
ZIC3O60481 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
ZIC3O60481 COX5BP7-201ENST00000414780 274 ntBASIC4.59□□□□□ -1.67
ZIC3O60481 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.59□□□□□ -1.67
ZIC3O60481 AC027644.1-201ENST00000419595 298 ntBASIC4.59□□□□□ -1.67
ZIC3O60481 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.59□□□□□ -1.67
ZIC3O60481 COX6CP13-201ENST00000428703 226 ntBASIC4.59□□□□□ -1.67
ZIC3O60481 AL136231.1-201ENST00000429407 730 ntBASIC4.59□□□□□ -1.67
ZIC3O60481 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
ZIC3O60481 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.59□□□□□ -1.67
ZIC3O60481 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.59□□□□□ -1.67
ZIC3O60481 AP000936.3-201ENST00000438127 255 ntBASIC4.59□□□□□ -1.67
ZIC3O60481 MTCYBP31-201ENST00000438855 1122 ntBASIC4.59□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms