Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AC068313.1-201ENST00000604028 1008 ntBASIC4.52□□□□□ -1.69
PRKNO60260 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC4.52□□□□□ -1.69
PRKNO60260 AC012557.1-201ENST00000607115 611 ntBASIC4.52□□□□□ -1.69
PRKNO60260 AC010424.2-201ENST00000607594 443 ntBASIC4.52□□□□□ -1.69
PRKNO60260 AC007497.1-201ENST00000610421 561 ntBASIC4.52□□□□□ -1.69
PRKNO60260 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC4.52□□□□□ -1.69
PRKNO60260 CYCSP41-201ENST00000616920 296 ntBASIC4.52□□□□□ -1.69
PRKNO60260 AL109659.3-201ENST00000624985 950 ntBASIC4.52□□□□□ -1.69
PRKNO60260 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRKNO60260 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PRKNO60260 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
PRKNO60260 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PRKNO60260 ZNF677-201ENST00000333952 3422 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PRKNO60260 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
PRKNO60260 AC007342.7-201ENST00000624610 2337 ntBASIC4.52□□□□□ -1.69
PRKNO60260 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRKNO60260 LINC01222-201ENST00000427439 1785 ntTSL 2 BASIC4.52□□□□□ -1.69
PRKNO60260 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
PRKNO60260 AC019072.1-201ENST00000604535 1551 ntBASIC4.52□□□□□ -1.69
PRKNO60260 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.52□□□□□ -1.69
PRKNO60260 AC007382.1-201ENST00000624376 2618 ntBASIC4.52□□□□□ -1.69
PRKNO60260 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
PRKNO60260 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
PRKNO60260 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
PRKNO60260 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC4.51□□□□□ -1.69
PRKNO60260 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRKNO60260 AC008758.3-201ENST00000507003 1829 ntBASIC4.51□□□□□ -1.69
PRKNO60260 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRKNO60260 MFSD8-213ENST00000641134 1327 ntBASIC4.51□□□□□ -1.69
PRKNO60260 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.51□□□□□ -1.69
PRKNO60260 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRKNO60260 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.51□□□□□ -1.69
PRKNO60260 ZNF29P-201ENST00000225587 168 ntBASIC4.51□□□□□ -1.69
PRKNO60260 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
PRKNO60260 U3.30-201ENST00000391308 210 ntBASIC4.51□□□□□ -1.69
PRKNO60260 RNA5SP113-201ENST00000410486 84 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AC115285.1-201ENST00000424879 736 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.51□□□□□ -1.69
PRKNO60260 HMGB3P5-201ENST00000428894 612 ntBASIC4.51□□□□□ -1.69
PRKNO60260 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC4.51□□□□□ -1.69
PRKNO60260 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC4.51□□□□□ -1.69
PRKNO60260 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRKNO60260 AL772161.1-201ENST00000439130 476 ntBASIC4.51□□□□□ -1.69
PRKNO60260 TPTE2P3-201ENST00000441562 1189 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AC073648.4-201ENST00000442655 781 ntBASIC4.51□□□□□ -1.69
PRKNO60260 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC4.51□□□□□ -1.69
PRKNO60260 RPL36AP15-201ENST00000444514 266 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AL160271.1-201ENST00000444708 829 ntTSL 3 BASIC4.51□□□□□ -1.69
PRKNO60260 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRKNO60260 SLC25A18P1-201ENST00000449385 454 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.51□□□□□ -1.69
PRKNO60260 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.51□□□□□ -1.69
PRKNO60260 RNU6-1308P-201ENST00000516817 103 ntBASIC4.51□□□□□ -1.69
PRKNO60260 Y_RNA.717-201ENST00000517106 92 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC4.51□□□□□ -1.69
PRKNO60260 AP001880.2-201ENST00000538233 448 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC4.51□□□□□ -1.69
PRKNO60260 CYB5AP5-201ENST00000549779 389 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AC087888.1-201ENST00000550884 1254 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AC006349.1-201ENST00000555526 235 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.51□□□□□ -1.69
PRKNO60260 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC4.51□□□□□ -1.69
PRKNO60260 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC4.51□□□□□ -1.69
PRKNO60260 MIR3667-201ENST00000581025 74 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AC012254.4-201ENST00000588843 273 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AC084373.1-201ENST00000603311 235 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AP002802.2-201ENST00000605877 235 ntBASIC4.51□□□□□ -1.69
PRKNO60260 OR6C71P-202ENST00000641886 1107 ntBASIC4.51□□□□□ -1.69
PRKNO60260 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRKNO60260 AC092376.2-201ENST00000622621 4116 ntBASIC4.51□□□□□ -1.69
PRKNO60260 PCGEM1-201ENST00000454040 1590 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
PRKNO60260 AL606537.1-201ENST00000607258 2011 ntBASIC4.51□□□□□ -1.69
PRKNO60260 AC083843.2-201ENST00000568248 6253 ntBASIC4.51□□□□□ -1.69
PRKNO60260 EPHA7-202ENST00000369303 6588 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
PRKNO60260 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRKNO60260 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
PRKNO60260 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.5□□□□□ -1.69
PRKNO60260 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
PRKNO60260 HSPD1P11-201ENST00000508643 1702 ntBASIC4.5□□□□□ -1.69
PRKNO60260 AL603750.1-201ENST00000624216 1717 ntBASIC4.5□□□□□ -1.69
PRKNO60260 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRKNO60260 SNORD56.4-201ENST00000363883 71 ntBASIC4.5□□□□□ -1.69
PRKNO60260 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
PRKNO60260 MT-TP-201ENST00000387461 68 ntBASIC4.5□□□□□ -1.69
PRKNO60260 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRKNO60260 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
PRKNO60260 RNU4-74P-201ENST00000411280 161 ntBASIC4.5□□□□□ -1.69
PRKNO60260 AC093422.3-201ENST00000428506 305 ntBASIC4.5□□□□□ -1.69
PRKNO60260 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC4.5□□□□□ -1.69
PRKNO60260 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.5□□□□□ -1.69
PRKNO60260 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC4.5□□□□□ -1.69
PRKNO60260 AC092447.2-201ENST00000435487 669 ntBASIC4.5□□□□□ -1.69
PRKNO60260 MTCYBP12-201ENST00000440559 1134 ntBASIC4.5□□□□□ -1.69
PRKNO60260 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.5□□□□□ -1.69
PRKNO60260 MRPL35P2-201ENST00000448009 511 ntBASIC4.5□□□□□ -1.69
PRKNO60260 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.5□□□□□ -1.69
PRKNO60260 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC4.5□□□□□ -1.69
PRKNO60260 RBMY2TP-201ENST00000451162 947 ntBASIC4.5□□□□□ -1.69
PRKNO60260 ZNF736P8Y-201ENST00000451913 669 ntBASIC4.5□□□□□ -1.69
PRKNO60260 TPT1P1-201ENST00000458495 518 ntBASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110 ms