Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC6.58□□□□□ -1.36
SOX1O00570 AC108078.3-201ENST00000502633 489 ntBASIC6.58□□□□□ -1.36
SOX1O00570 Y_RNA.701-201ENST00000516812 110 ntBASIC6.58□□□□□ -1.36
SOX1O00570 AP001893.2-201ENST00000526949 202 ntBASIC6.58□□□□□ -1.36
SOX1O00570 AC092112.1-201ENST00000538329 640 ntTSL 3 BASIC6.58□□□□□ -1.36
SOX1O00570 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC6.58□□□□□ -1.36
SOX1O00570 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC6.58□□□□□ -1.36
SOX1O00570 HMGB1P33-201ENST00000563485 527 ntBASIC6.58□□□□□ -1.36
SOX1O00570 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC6.58□□□□□ -1.36
SOX1O00570 AC136618.2-201ENST00000575091 400 ntBASIC6.58□□□□□ -1.36
SOX1O00570 MIR4646-201ENST00000580775 63 ntBASIC6.58□□□□□ -1.36
SOX1O00570 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC6.58□□□□□ -1.36
SOX1O00570 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC6.58□□□□□ -1.36
SOX1O00570 AC010463.3-201ENST00000594077 500 ntBASIC6.58□□□□□ -1.36
SOX1O00570 AL596327.1-201ENST00000603629 213 ntBASIC6.58□□□□□ -1.36
SOX1O00570 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 AL009028.1-201ENST00000604895 802 ntBASIC6.58□□□□□ -1.36
SOX1O00570 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 AP001506.1-201ENST00000615444 211 ntBASIC6.58□□□□□ -1.36
SOX1O00570 VPS8-228ENST00000628962 207 ntTSL 5 BASIC6.58□□□□□ -1.36
SOX1O00570 CRYM-AS1-204ENST00000637983 556 ntBASIC6.58□□□□□ -1.36
SOX1O00570 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 RPL7L1-201ENST00000304734 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 TBX15-201ENST00000207157 3492 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC6.58□□□□□ -1.36
SOX1O00570 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.58□□□□□ -1.36
SOX1O00570 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
SOX1O00570 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
SOX1O00570 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
SOX1O00570 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
SOX1O00570 DCC-215ENST00000581580 3517 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 LINC00598-215ENST00000638084 1974 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 ADAM3A-207ENST00000490268 2627 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 AL359396.1-201ENST00000623151 2376 ntBASIC6.57□□□□□ -1.36
SOX1O00570 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
SOX1O00570 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 Y_RNA.89-201ENST00000363031 102 ntBASIC6.57□□□□□ -1.36
SOX1O00570 RNU6-1066P-201ENST00000363573 105 ntBASIC6.57□□□□□ -1.36
SOX1O00570 RNU6-534P-201ENST00000364877 106 ntBASIC6.57□□□□□ -1.36
SOX1O00570 CD163-202ENST00000396620 3800 ntAPPRIS ALT2 TSL 2 BASIC6.57□□□□□ -1.36
SOX1O00570 CYB5AP4-201ENST00000396692 399 ntBASIC6.57□□□□□ -1.36
SOX1O00570 AL109941.1-201ENST00000401925 229 ntBASIC6.57□□□□□ -1.36
SOX1O00570 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 GSTA9P-201ENST00000406231 611 ntBASIC6.57□□□□□ -1.36
SOX1O00570 RPL23AP47-201ENST00000408017 460 ntBASIC6.57□□□□□ -1.36
SOX1O00570 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.57□□□□□ -1.36
SOX1O00570 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC6.57□□□□□ -1.36
SOX1O00570 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX1O00570 AC069157.1-201ENST00000421749 137 ntBASIC6.57□□□□□ -1.36
SOX1O00570 RPS27AP14-201ENST00000422868 454 ntBASIC6.57□□□□□ -1.36
SOX1O00570 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX1O00570 ATP5HP2-201ENST00000433885 485 ntBASIC6.57□□□□□ -1.36
SOX1O00570 MTCYBP45-201ENST00000435243 565 ntBASIC6.57□□□□□ -1.36
SOX1O00570 RPS11P7-201ENST00000442125 465 ntBASIC6.57□□□□□ -1.36
SOX1O00570 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.57□□□□□ -1.36
SOX1O00570 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC6.57□□□□□ -1.36
SOX1O00570 MTND4P19-201ENST00000446659 478 ntBASIC6.57□□□□□ -1.36
SOX1O00570 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC6.57□□□□□ -1.36
SOX1O00570 AL356981.1-201ENST00000454879 684 ntBASIC6.57□□□□□ -1.36
SOX1O00570 RPS29P33-201ENST00000456717 146 ntBASIC6.57□□□□□ -1.36
SOX1O00570 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.57□□□□□ -1.36
SOX1O00570 AHI1-208ENST00000488690 712 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 AC111193.1-201ENST00000504097 155 ntBASIC6.57□□□□□ -1.36
SOX1O00570 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC6.57□□□□□ -1.36
SOX1O00570 AC138409.2-202ENST00000507274 458 ntBASIC6.57□□□□□ -1.36
SOX1O00570 AC114786.4-201ENST00000508771 728 ntBASIC6.57□□□□□ -1.36
SOX1O00570 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX1O00570 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX1O00570 OR5M7P-201ENST00000526140 972 ntBASIC6.57□□□□□ -1.36
SOX1O00570 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 OR6M2P-201ENST00000529831 871 ntBASIC6.57□□□□□ -1.36
SOX1O00570 AL157687.1-201ENST00000554853 619 ntBASIC6.57□□□□□ -1.36
SOX1O00570 AL049872.1-201ENST00000556323 322 ntBASIC6.57□□□□□ -1.36
SOX1O00570 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC6.57□□□□□ -1.36
SOX1O00570 AC138035.1-202ENST00000604669 683 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
SOX1O00570 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.57□□□□□ -1.36
SOX1O00570 RN7SL544P-201ENST00000617232 284 ntBASIC6.57□□□□□ -1.36
SOX1O00570 MIR6837-201ENST00000620884 64 ntBASIC6.57□□□□□ -1.36
SOX1O00570 RN7SL763P-201ENST00000620922 284 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 95.5 ms