Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 LINC01088-203ENST00000507476 785 ntTSL 3 BASIC4.73□□□□□ -1.65
RTCAO00442 MRPS33P2-201ENST00000507850 322 ntBASIC4.73□□□□□ -1.65
RTCAO00442 AC110775.1-201ENST00000513721 462 ntBASIC4.73□□□□□ -1.65
RTCAO00442 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC4.73□□□□□ -1.65
RTCAO00442 HMGB1P19-201ENST00000517578 577 ntBASIC4.73□□□□□ -1.65
RTCAO00442 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC4.73□□□□□ -1.65
RTCAO00442 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.73□□□□□ -1.65
RTCAO00442 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.73□□□□□ -1.65
RTCAO00442 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.73□□□□□ -1.65
RTCAO00442 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC4.73□□□□□ -1.65
RTCAO00442 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC4.73□□□□□ -1.65
RTCAO00442 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC4.73□□□□□ -1.65
RTCAO00442 OR4H6P-202ENST00000603819 340 ntBASIC4.73□□□□□ -1.65
RTCAO00442 MEMO1P5-201ENST00000604810 406 ntBASIC4.73□□□□□ -1.65
RTCAO00442 SDR42E1P1-201ENST00000611327 477 ntBASIC4.73□□□□□ -1.65
RTCAO00442 AC016769.4-201ENST00000616893 535 ntBASIC4.73□□□□□ -1.65
RTCAO00442 AK6-205ENST00000618980 483 ntTSL 2 BASIC4.73□□□□□ -1.65
RTCAO00442 CDRT1-208ENST00000630868 794 ntBASIC4.73□□□□□ -1.65
RTCAO00442 AC002384.2-201ENST00000636036 790 ntTSL 3 BASIC4.73□□□□□ -1.65
RTCAO00442 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTCAO00442 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RTCAO00442 LINC01355-201ENST00000566551 5444 ntBASIC4.73□□□□□ -1.65
RTCAO00442 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RTCAO00442 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.73□□□□□ -1.65
RTCAO00442 CNTN5-201ENST00000279463 5925 ntTSL 5 BASIC4.73□□□□□ -1.65
RTCAO00442 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
RTCAO00442 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC4.73□□□□□ -1.65
RTCAO00442 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.73□□□□□ -1.65
RTCAO00442 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RTCAO00442 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.72□□□□□ -1.65
RTCAO00442 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.72□□□□□ -1.65
RTCAO00442 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC4.72□□□□□ -1.65
RTCAO00442 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.72□□□□□ -1.65
RTCAO00442 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RTCAO00442 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.72□□□□□ -1.65
RTCAO00442 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.72□□□□□ -1.65
RTCAO00442 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RTCAO00442 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
RTCAO00442 SNORA73.1-201ENST00000363107 205 ntBASIC4.72□□□□□ -1.65
RTCAO00442 HMGB1P13-201ENST00000406019 642 ntBASIC4.72□□□□□ -1.65
RTCAO00442 RNU4-34P-201ENST00000410431 124 ntBASIC4.72□□□□□ -1.65
RTCAO00442 RNU2-72P-201ENST00000411175 163 ntBASIC4.72□□□□□ -1.65
RTCAO00442 TCEA1P4-201ENST00000415066 844 ntBASIC4.72□□□□□ -1.65
RTCAO00442 AC234782.4-201ENST00000417646 1048 ntBASIC4.72□□□□□ -1.65
RTCAO00442 RPS12P5-201ENST00000423449 371 ntBASIC4.72□□□□□ -1.65
RTCAO00442 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.72□□□□□ -1.65
RTCAO00442 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC4.72□□□□□ -1.65
RTCAO00442 RPL35AP21-201ENST00000437667 333 ntBASIC4.72□□□□□ -1.65
RTCAO00442 AL137845.2-201ENST00000444292 988 ntBASIC4.72□□□□□ -1.65
RTCAO00442 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.72□□□□□ -1.65
RTCAO00442 AC073850.1-201ENST00000449243 255 ntBASIC4.72□□□□□ -1.65
RTCAO00442 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC4.72□□□□□ -1.65
RTCAO00442 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.72□□□□□ -1.65
RTCAO00442 AC069304.1-201ENST00000491593 704 ntBASIC4.72□□□□□ -1.65
RTCAO00442 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC4.72□□□□□ -1.65
RTCAO00442 ATG10-208ENST00000513634 618 ntTSL 2 BASIC4.72□□□□□ -1.65
RTCAO00442 RNU6ATAC24P-201ENST00000516811 135 ntBASIC4.72□□□□□ -1.65
RTCAO00442 AC013701.1-201ENST00000522657 465 ntBASIC4.72□□□□□ -1.65
RTCAO00442 AC005868.1-201ENST00000536421 331 ntBASIC4.72□□□□□ -1.65
RTCAO00442 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 NOP56P3-201ENST00000549457 385 ntBASIC4.72□□□□□ -1.65
RTCAO00442 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC4.72□□□□□ -1.65
RTCAO00442 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.72□□□□□ -1.65
RTCAO00442 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 AC233280.2-201ENST00000603917 1070 ntBASIC4.72□□□□□ -1.65
RTCAO00442 AC097372.4-201ENST00000625025 466 ntBASIC4.72□□□□□ -1.65
RTCAO00442 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.72□□□□□ -1.65
RTCAO00442 SAMMSON-227ENST00000642114 1199 ntBASIC4.72□□□□□ -1.65
RTCAO00442 ECM1P2-201ENST00000503354 1577 ntBASIC4.72□□□□□ -1.65
RTCAO00442 ZNF90P1-201ENST00000480493 1951 ntBASIC4.72□□□□□ -1.65
RTCAO00442 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 IPO11-203ENST00000409534 1725 ntTSL 2 BASIC4.72□□□□□ -1.65
RTCAO00442 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
RTCAO00442 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RTCAO00442 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.65
RTCAO00442 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RTCAO00442 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RTCAO00442 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RTCAO00442 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC4.71□□□□□ -1.66
RTCAO00442 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RTCAO00442 AC025031.4-201ENST00000621248 3271 ntBASIC4.71□□□□□ -1.66
RTCAO00442 RNA5SP507-201ENST00000363603 121 ntBASIC4.71□□□□□ -1.66
RTCAO00442 SNORD115-48-201ENST00000364764 76 ntBASIC4.71□□□□□ -1.66
RTCAO00442 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RTCAO00442 RNU6-40P-201ENST00000384254 107 ntBASIC4.71□□□□□ -1.66
RTCAO00442 SNORA40.4-201ENST00000390971 128 ntBASIC4.71□□□□□ -1.66
RTCAO00442 RN7SKP213-201ENST00000410746 298 ntBASIC4.71□□□□□ -1.66
RTCAO00442 FO393419.3-201ENST00000428741 282 ntBASIC4.71□□□□□ -1.66
RTCAO00442 ZNF965P-201ENST00000432501 817 ntBASIC4.71□□□□□ -1.66
RTCAO00442 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 84.5 ms