Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.99□□□□□ -1.61
O00370 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.99□□□□□ -1.61
O00370 AL133247.2-201ENST00000603236 482 ntBASIC4.99□□□□□ -1.61
O00370 AC098935.2-201ENST00000604222 466 ntBASIC4.99□□□□□ -1.61
O00370 AC234782.5-201ENST00000617723 324 ntBASIC4.99□□□□□ -1.61
O00370 AC015908.5-201ENST00000623289 343 ntBASIC4.99□□□□□ -1.61
O00370 AC079298.2-201ENST00000623885 459 ntBASIC4.99□□□□□ -1.61
O00370 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.99□□□□□ -1.61
O00370 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
O00370 BX005019.1-201ENST00000561881 1810 ntBASIC4.99□□□□□ -1.61
O00370 AC009313.2-201ENST00000417893 1941 ntBASIC4.99□□□□□ -1.61
O00370 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
O00370 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
O00370 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.98□□□□□ -1.61
O00370 CASC19-284ENST00000642142 1868 ntBASIC4.98□□□□□ -1.61
O00370 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
O00370 AC092435.4-201ENST00000623012 4159 ntBASIC4.98□□□□□ -1.61
O00370 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.98□□□□□ -1.61
O00370 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
O00370 AP000756.2-201ENST00000624168 2567 ntBASIC4.98□□□□□ -1.61
O00370 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
O00370 AL590240.1-201ENST00000334118 313 ntBASIC4.98□□□□□ -1.61
O00370 RNA5SP372-201ENST00000390836 115 ntBASIC4.98□□□□□ -1.61
O00370 CDKL4-202ENST00000395035 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
O00370 RPL6P29-201ENST00000414863 865 ntBASIC4.98□□□□□ -1.61
O00370 AC140479.3-201ENST00000418944 1126 ntBASIC4.98□□□□□ -1.61
O00370 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC4.98□□□□□ -1.61
O00370 AL390879.2-203ENST00000426943 1121 ntBASIC4.98□□□□□ -1.61
O00370 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
O00370 H2AFZP5-201ENST00000446960 382 ntBASIC4.98□□□□□ -1.61
O00370 AC104651.2-201ENST00000447549 528 ntBASIC4.98□□□□□ -1.61
O00370 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC4.98□□□□□ -1.61
O00370 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC4.98□□□□□ -1.61
O00370 RPL36AP41-201ENST00000493820 306 ntBASIC4.98□□□□□ -1.61
O00370 AC025164.1-201ENST00000496249 478 ntBASIC4.98□□□□□ -1.61
O00370 AC108157.1-201ENST00000510511 539 ntBASIC4.98□□□□□ -1.61
O00370 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC4.98□□□□□ -1.61
O00370 IGKV1-32-201ENST00000519290 311 ntBASIC4.98□□□□□ -1.61
O00370 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.98□□□□□ -1.61
O00370 AC022882.1-201ENST00000532142 501 ntBASIC4.98□□□□□ -1.61
O00370 GABARAPL1-212ENST00000543602 653 ntTSL 5 BASIC4.98□□□□□ -1.61
O00370 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.98□□□□□ -1.61
O00370 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC4.98□□□□□ -1.61
O00370 RN7SL652P-201ENST00000577769 300 ntBASIC4.98□□□□□ -1.61
O00370 MIMT1-201ENST00000597105 1050 ntBASIC4.98□□□□□ -1.61
O00370 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC4.98□□□□□ -1.61
O00370 AC073091.2-201ENST00000603205 907 ntBASIC4.98□□□□□ -1.61
O00370 OR7A19P-201ENST00000608051 733 ntBASIC4.98□□□□□ -1.61
O00370 AL356490.1-201ENST00000623079 479 ntBASIC4.98□□□□□ -1.61
O00370 AC011815.3-201ENST00000624194 473 ntBASIC4.98□□□□□ -1.61
O00370 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC4.98□□□□□ -1.61
O00370 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.98□□□□□ -1.61
O00370 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
O00370 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.98□□□□□ -1.61
O00370 AC104118.1-201ENST00000607625 1589 ntBASIC4.98□□□□□ -1.61
O00370 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
O00370 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.98□□□□□ -1.61
O00370 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
O00370 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
O00370 HSPD1P11-201ENST00000508643 1702 ntBASIC4.97□□□□□ -1.61
O00370 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
O00370 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.97□□□□□ -1.61
O00370 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
O00370 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
O00370 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
O00370 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
O00370 RNVU1-6-201ENST00000364688 164 ntBASIC4.97□□□□□ -1.61
O00370 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
O00370 AL035419.1-201ENST00000397037 564 ntBASIC4.97□□□□□ -1.61
O00370 AL356057.1-202ENST00000402263 756 ntBASIC4.97□□□□□ -1.61
O00370 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.97□□□□□ -1.61
O00370 AL357078.2-201ENST00000416486 427 ntBASIC4.97□□□□□ -1.61
O00370 ATG4AP1-201ENST00000416893 538 ntBASIC4.97□□□□□ -1.61
O00370 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.97□□□□□ -1.61
O00370 RPS26P47-201ENST00000427219 348 ntBASIC4.97□□□□□ -1.61
O00370 LINC01878-201ENST00000434559 769 ntTSL 3 BASIC4.97□□□□□ -1.61
O00370 MTCYBP29-201ENST00000436327 1006 ntBASIC4.97□□□□□ -1.61
O00370 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.97□□□□□ -1.61
O00370 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.97□□□□□ -1.61
O00370 AC090142.1-201ENST00000465776 462 ntBASIC4.97□□□□□ -1.61
O00370 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC4.97□□□□□ -1.61
O00370 SSR3-208ENST00000496050 579 ntTSL 4 BASIC4.97□□□□□ -1.61
O00370 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC4.97□□□□□ -1.61
O00370 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC4.97□□□□□ -1.61
O00370 SETP12-201ENST00000514068 805 ntBASIC4.97□□□□□ -1.61
O00370 RNU6-889P-201ENST00000517189 103 ntBASIC4.97□□□□□ -1.61
O00370 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.97□□□□□ -1.61
O00370 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC4.97□□□□□ -1.61
O00370 OR5M2P-201ENST00000529003 936 ntBASIC4.97□□□□□ -1.61
O00370 PAFAH1B2-206ENST00000530272 850 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
O00370 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC4.97□□□□□ -1.61
O00370 C11orf74-210ENST00000534635 801 ntAPPRIS ALT2 TSL 2 BASIC4.97□□□□□ -1.61
O00370 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.97□□□□□ -1.61
O00370 MIR4700-201ENST00000578311 74 ntBASIC4.97□□□□□ -1.61
O00370 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.97□□□□□ -1.61
O00370 AC068790.7-201ENST00000602347 528 ntBASIC4.97□□□□□ -1.61
O00370 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC4.97□□□□□ -1.61
O00370 AC007423.1-201ENST00000605009 627 ntBASIC4.97□□□□□ -1.61
O00370 AC100827.5-201ENST00000615883 426 ntBASIC4.97□□□□□ -1.61
O00370 AC004232.3-201ENST00000622977 525 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms