Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 AL359219.2-201ENST00000555184 348 ntBASIC5.44□□□□□ -1.54
RGPD3A6NKT7 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 AC005034.4-201ENST00000603612 899 ntBASIC5.44□□□□□ -1.54
RGPD3A6NKT7 AL354798.1-201ENST00000622505 329 ntBASIC5.44□□□□□ -1.54
RGPD3A6NKT7 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
RGPD3A6NKT7 VPS35P1-201ENST00000563400 1518 ntBASIC5.44□□□□□ -1.54
RGPD3A6NKT7 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 ZNF532-201ENST00000336078 6696 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 AC022417.1-201ENST00000624768 1303 ntBASIC5.43□□□□□ -1.54
RGPD3A6NKT7 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 PDSS1P1-201ENST00000422953 1114 ntBASIC5.43□□□□□ -1.54
RGPD3A6NKT7 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 AC007422.1-201ENST00000433065 1008 ntTSL 5 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 AL139350.1-201ENST00000448825 408 ntTSL 3 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 AC074250.1-201ENST00000511117 192 ntBASIC5.43□□□□□ -1.54
RGPD3A6NKT7 RNU6-352P-201ENST00000516908 107 ntBASIC5.43□□□□□ -1.54
RGPD3A6NKT7 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 AL592436.1-201ENST00000605135 558 ntBASIC5.43□□□□□ -1.54
RGPD3A6NKT7 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC5.43□□□□□ -1.54
RGPD3A6NKT7 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 ATP5F1P4-201ENST00000397288 746 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 RNU4-6P-201ENST00000410804 122 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 AL451050.1-201ENST00000450126 415 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 RPL23AP81-201ENST00000455252 467 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 RPL36AP13-201ENST00000457490 317 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 RPL38P1-201ENST00000460914 211 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 PLGLA-201ENST00000465668 449 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 AF213884.1-201ENST00000488102 463 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 AC016550.3-201ENST00000515706 767 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 AC130352.1-201ENST00000602979 661 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 CCT7-217ENST00000626868 249 ntTSL 5 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 AC116667.1-201ENST00000604855 2072 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 SENP1-205ENST00000549595 1932 ntAPPRIS ALT1 TSL 5 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 AL359922.3-201ENST00000624779 1670 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 RN7SKP177-201ENST00000410567 355 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 AL049634.3-201ENST00000604968 457 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 AC010201.1-201ENST00000605051 540 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 OR2BH1P-201ENST00000608850 864 ntBASIC5.42□□□□□ -1.54
RGPD3A6NKT7 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 PACRG-211ENST00000621363 360 ntTSL 5 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
RGPD3A6NKT7 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 RNU1-20P-201ENST00000363314 162 ntBASIC5.41□□□□□ -1.54
RGPD3A6NKT7 MIR34B-201ENST00000385076 84 ntBASIC5.41□□□□□ -1.54
RGPD3A6NKT7 DDX39BP2-208ENST00000453923 258 ntBASIC5.41□□□□□ -1.54
RGPD3A6NKT7 AL139099.1-201ENST00000497398 403 ntBASIC5.41□□□□□ -1.54
RGPD3A6NKT7 MIR5195-201ENST00000583555 115 ntBASIC5.41□□□□□ -1.54
RGPD3A6NKT7 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 U3.45-201ENST00000607547 219 ntBASIC5.41□□□□□ -1.54
RGPD3A6NKT7 AC015804.1-201ENST00000622935 435 ntBASIC5.41□□□□□ -1.54
RGPD3A6NKT7 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 NAMPTP1-201ENST00000440465 2514 ntBASIC5.41□□□□□ -1.54
RGPD3A6NKT7 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC5.41□□□□□ -1.54
RGPD3A6NKT7 AC068870.3-201ENST00000625077 2536 ntBASIC5.4□□□□□ -1.54
RGPD3A6NKT7 STAG1-202ENST00000383202 6055 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RGPD3A6NKT7 RWDD2B-207ENST00000493196 3094 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
RGPD3A6NKT7 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms