Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 AC245028.2-201ENST00000458673 253 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC092691.2-201ENST00000461787 803 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 SNORA70.11-201ENST00000515987 138 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 SNORA70.13-201ENST00000516116 138 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 RNA5SP43-201ENST00000516559 110 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC138832.1-201ENST00000522871 556 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC012339.2-201ENST00000523996 453 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AP000462.1-201ENST00000535704 818 ntTSL 3 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC006349.1-201ENST00000555526 235 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC104229.1-201ENST00000561364 255 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AL606834.3-201ENST00000602615 496 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AP002802.2-201ENST00000605877 235 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC092653.1-201ENST00000608509 531 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 AC009464.1-201ENST00000615731 469 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 CYCSP41-201ENST00000616920 296 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 IRF5P1-201ENST00000504852 2164 ntBASIC5.08□□□□□ -1.6
RAI2Q9Y5P3 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 MFSD8-216ENST00000641147 4009 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 MAP3K2-201ENST00000344908 2135 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 RNU5B-4P-201ENST00000363508 111 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 RNU6-31P-201ENST00000384388 108 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 SNORA70.10-201ENST00000384515 134 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 ATP5HP3-201ENST00000396994 486 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 UBE2V1P11-201ENST00000411559 285 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 OR2AM1P-201ENST00000422137 422 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC092447.3-201ENST00000426027 686 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 DEFB130D-201ENST00000426866 237 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 RSL24D1P6-201ENST00000426934 401 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 CETN4P-201ENST00000432407 469 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AL035246.1-201ENST00000433554 1255 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 KCTD10P1-201ENST00000434203 625 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC092447.2-201ENST00000435487 669 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 OR7E125P-201ENST00000443450 846 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 TDGF1P1-201ENST00000445734 527 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC044797.1-201ENST00000445744 679 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 EXOSC3P1-201ENST00000448649 500 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AL009048.1-201ENST00000450437 298 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 HMGB1P4-201ENST00000455362 567 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 RPL7AP28-201ENST00000464513 571 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 EEF1A1P37-201ENST00000522748 715 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 HAUS1P3-201ENST00000523909 662 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 CYB5AP5-201ENST00000549779 389 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC127024.5-201ENST00000580085 462 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 SUMO2P14-201ENST00000604488 293 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC099785.1-201ENST00000605697 437 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC009159.2-201ENST00000617603 606 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 AC241377.1-201ENST00000619797 406 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 ADAM5-202ENST00000399789 1942 ntBASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RAI2Q9Y5P3 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.06□□□□□ -1.6
RAI2Q9Y5P3 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RAI2Q9Y5P3 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAI2Q9Y5P3 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC5.06□□□□□ -1.6
RAI2Q9Y5P3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RAI2Q9Y5P3 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms