Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNU2-50P-201ENST00000410494 143 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 RPL36AP10-201ENST00000421785 322 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 RPL7P57-201ENST00000423238 740 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 FAR1P1-201ENST00000427163 934 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 ZNF965P-201ENST00000432501 817 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 NRBF2P3-201ENST00000432731 865 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 NMNAT1P2-201ENST00000435192 860 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 CD200R1-203ENST00000440122 847 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 MRPL48P1-201ENST00000445390 636 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC109349.1-201ENST00000503299 758 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC010627.1-201ENST00000503819 1294 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 MTCO1P31-201ENST00000506355 492 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 LINC02480-201ENST00000511875 612 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 RNA5SP228-201ENST00000516232 133 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 RNU1-6P-201ENST00000516290 144 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 HMGB1P19-201ENST00000517578 577 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC068714.1-201ENST00000559623 800 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 MIR3667-201ENST00000581025 74 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 RN7SL435P-201ENST00000584418 282 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC118757.1-201ENST00000586982 453 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 FP236315.3-201ENST00000623587 307 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AC090017.1-201ENST00000548612 1779 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 HSD17B11-201ENST00000358290 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 AL451142.2-201ENST00000429076 2090 ntBASIC4.49□□□□□ -1.69
ATG4BQ9Y4P1 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 SNORD115-48-201ENST00000364764 76 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 SNORA68.2-201ENST00000391263 128 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 NCSTNP1-201ENST00000406229 144 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 RNU4-74P-201ENST00000411280 161 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 RPL37P18-201ENST00000411602 243 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 RSU1P3-201ENST00000412878 835 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AL160175.1-201ENST00000428124 247 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 HMGB1P26-201ENST00000452520 628 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC079168.2-201ENST00000453977 416 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 IGLV2-34-201ENST00000490007 283 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 OR9N1P-202ENST00000494289 481 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC073358.1-201ENST00000505671 684 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 OR7H2P-201ENST00000513483 306 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 CDH12P4-201ENST00000517835 295 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 CDH12P3-201ENST00000517935 295 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 CDH12P1-201ENST00000518435 295 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AP002765.2-201ENST00000532961 666 ntTSL 3 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 UBE2FP2-201ENST00000566646 462 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC002091.1-201ENST00000578788 557 ntTSL 2 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AL355802.4-201ENST00000607635 548 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 MIR8069-1-201ENST00000616627 86 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 MIR8069-2-201ENST00000621412 86 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 TANK-205ENST00000405852 2155 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AP000756.2-201ENST00000624168 2567 ntBASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
ATG4BQ9Y4P1 AC093535.2-201ENST00000624769 2326 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 DHX9P1-201ENST00000436565 3076 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC120338.1-201ENST00000625074 1541 ntBASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
ATG4BQ9Y4P1 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 83.4 ms