Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 HMGB1P46-201ENST00000520062 610 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AL049839.1-201ENST00000556151 657 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 MTND6P33-201ENST00000571794 183 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AL121834.1-201ENST00000572284 509 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 RPL7P50-201ENST00000600588 727 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AC104695.2-201ENST00000605056 775 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AC015802.5-201ENST00000607478 399 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AC139769.3-201ENST00000618383 175 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 AL031985.3-201ENST00000565390 2449 ntBASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
KCNIP3Q9Y2W7 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 CDKL3-209ENST00000523054 1775 ntTSL 2 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AL133412.1-201ENST00000380194 2992 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 OR2D2-201ENST00000299459 1110 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 RNU6-1279P-201ENST00000383917 103 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 RNU6-40P-201ENST00000384254 107 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AL589647.1-201ENST00000402485 466 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 HNRNPA3P4-201ENST00000427514 803 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AL160175.1-201ENST00000428124 247 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 NANOGP6-201ENST00000429190 847 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 BX119904.1-201ENST00000432026 348 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 PSMD10P3-201ENST00000437000 448 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 RPS26P41-201ENST00000450370 284 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 RPS27AP2-201ENST00000457576 465 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 RPL7P48-201ENST00000461513 746 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 RN7SL319P-201ENST00000480656 221 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AC107398.1-201ENST00000486904 505 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AC100770.1-201ENST00000532310 322 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AC069240.1-201ENST00000548774 375 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AC068446.3-201ENST00000555285 382 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AC209154.1-201ENST00000582156 337 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 MIR4271-201ENST00000582451 67 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 CR589904.2-201ENST00000612533 440 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AC044839.1-205ENST00000614989 542 ntTSL 5 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 DDX6P1-205ENST00000441966 1436 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 FCHSD2-205ENST00000409853 1867 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 IQCB2P-201ENST00000401788 1633 ntBASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.92□□□□□ -1.78
KCNIP3Q9Y2W7 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 RHOT1P2-201ENST00000366423 333 ntBASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 SNORA70-201ENST00000384436 135 ntBASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 CCNB2P1-201ENST00000399411 1150 ntBASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 RNU4-74P-201ENST00000411280 161 ntBASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 CENPIP1-201ENST00000425713 902 ntBASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 NPM1P24-201ENST00000428039 894 ntBASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC3.91□□□□□ -1.78
KCNIP3Q9Y2W7 RPL23AP19-201ENST00000436229 369 ntBASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms