Protein–RNA interactions for Protein: Q9UGP4

LIMD1, LIM domain-containing protein 1, humanhuman

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1Q9UGP4 MTCYBP13-201ENST00000578634 1093 ntBASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 AL353997.4-201ENST00000586196 166 ntBASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 AC136443.5-201ENST00000603741 370 ntBASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 AC025162.2-201ENST00000619602 560 ntBASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 AC027559.1-201ENST00000636288 271 ntBASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 AC010886.1-201ENST00000437380 2869 ntBASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 SYNPO2-203ENST00000434046 3588 ntTSL 1 (best) BASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC7.38□□□□□ -1.23
LIMD1Q9UGP4 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC091544.5-201ENST00000620192 3815 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 DNM1L-203ENST00000381000 4397 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC104581.5-201ENST00000624171 7141 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 SLC6A16-202ENST00000454748 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 BBOX1-201ENST00000263182 1886 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 HP1BP3-201ENST00000312239 3938 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 OR1D2-201ENST00000331459 939 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 MRAP-202ENST00000339944 440 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 RNA5SP308-201ENST00000362532 115 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 RNU1-5P-201ENST00000362684 144 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 Y_RNA.100-201ENST00000363141 102 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 RNA5SP232-201ENST00000364144 119 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 SNORA33.2-201ENST00000365413 134 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 RNU6-43P-201ENST00000384302 107 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 RNU6-463P-201ENST00000384340 107 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 RNU6-606P-201ENST00000384721 111 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 Y_RNA.579-201ENST00000390939 94 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AHCYP8-201ENST00000425108 209 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AL121776.1-201ENST00000429337 372 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 MTCO3P21-201ENST00000430791 643 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 FTH1P10-202ENST00000430907 550 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 EIF5AP4-201ENST00000441206 465 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC234771.2-201ENST00000445718 597 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 CACYBPP2-201ENST00000453625 678 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AL163973.1-201ENST00000484753 577 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 RN7SKP96-201ENST00000516948 297 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 IGLVIV-64-201ENST00000518581 301 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 ZNF705CP-201ENST00000530515 889 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC093012.1-202ENST00000549403 582 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 SCOCP1-201ENST00000554676 349 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC098848.2-201ENST00000588023 330 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC011921.2-201ENST00000589465 152 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 RPS11-205ENST00000599561 430 ntTSL 5 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 SNRPGP17-201ENST00000603780 214 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC124312.5-201ENST00000604451 268 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AP001521.2-201ENST00000608772 546 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 uc_338.29-201ENST00000615099 168 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC073488.2-201ENST00000631903 751 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC067968.1-201ENST00000591793 3766 ntAPPRIS P1 TSL 2 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 KIF13A-205ENST00000378843 5707 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 ARPP21-221ENST00000444190 3182 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 CHURC1-208ENST00000607599 3615 ntTSL 2 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 AC092447.10-201ENST00000620607 1652 ntBASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 LEPR-203ENST00000371058 2805 ntTSL 5 BASIC7.37□□□□□ -1.23
LIMD1Q9UGP4 CEP41-213ENST00000489512 3161 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 PHLPP2-201ENST00000393524 8467 ntTSL 2 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC013488.1-201ENST00000526618 1838 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 OR2L13-203ENST00000641893 1817 ntAPPRIS P1 BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC105749.1-201ENST00000631338 2008 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 OR5P1P-201ENST00000299512 925 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AC073343.1-201ENST00000328239 651 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 AL161781.1-201ENST00000354277 403 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 RNU1-85P-201ENST00000364127 164 ntBASIC7.36□□□□□ -1.23
LIMD1Q9UGP4 RNU6-996P-201ENST00000365438 107 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms