Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 OR5M7P-201ENST00000526140 972 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 AP001893.2-201ENST00000526949 202 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 AL391840.1-201ENST00000571144 367 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 AP005119.2-201ENST00000579735 1105 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 AC010487.1-201ENST00000594408 1172 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 AC112187.2-201ENST00000604345 283 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 AP001437.1-201ENST00000608783 456 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 AC120349.2-201ENST00000625002 298 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 AC093591.3-201ENST00000634516 308 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 GLIPR1L2-202ENST00000378692 1903 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CNTN3Q9P232 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CNTN3Q9P232 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CNTN3Q9P232 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 OLMALINC-203ENST00000641087 3779 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 MSL3P1-202ENST00000440028 1468 ntBASIC6.77□□□□□ -1.33
CNTN3Q9P232 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CNTN3Q9P232 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
CNTN3Q9P232 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CNTN3Q9P232 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 FOPNL-201ENST00000255759 2275 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 ST7-203ENST00000393443 2360 ntTSL 2 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 PTPRT-209ENST00000612229 11285 ntTSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 IPCEF1-210ENST00000519344 1621 ntAPPRIS ALT2 TSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 Y_RNA.535-201ENST00000384612 99 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 UBE2V1P14-201ENST00000415815 558 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 CYP4F30P-202ENST00000420048 405 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 ATP5A1P8-201ENST00000423669 1291 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 AL356583.2-201ENST00000426536 280 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC005033.1-201ENST00000428904 813 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 RPL7P56-201ENST00000429441 717 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 PPIAP10-201ENST00000438675 458 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC092967.1-201ENST00000449016 481 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 NPM1P39-201ENST00000449818 867 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 VPS25P1-201ENST00000455691 508 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC074386.1-201ENST00000476560 767 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC013828.1-201ENST00000481845 158 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC009646.1-201ENST00000510455 318 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 RN7SKP35-201ENST00000517210 151 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 IGHV1-14-201ENST00000523391 241 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 SLC2A13P1-201ENST00000531560 322 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 OR8L1P-201ENST00000534005 955 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 AL157687.1-201ENST00000554853 619 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 TRAV15-201ENST00000556680 249 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 HMGB1P33-201ENST00000563485 527 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC011497.2-201ENST00000600255 639 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC006924.1-201ENST00000610750 559 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC024255.1-201ENST00000614376 102 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 AC008250.2-201ENST00000615261 205 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 AP003400.3-201ENST00000624904 346 ntBASIC6.76□□□□□ -1.33
CNTN3Q9P232 FER-210ENST00000628534 558 ntTSL 5 BASIC6.76□□□□□ -1.33
CNTN3Q9P232 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CNTN3Q9P232 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.7 ms