Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 RNF2P1-201ENST00000442955 1010 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 EIF2S2P5-201ENST00000457635 968 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC078857.1-201ENST00000469870 667 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 RN7SL41P-201ENST00000476144 297 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC108729.2-201ENST00000476543 840 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 STRADBP1-201ENST00000478954 1281 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC093663.2-201ENST00000484625 313 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 RPL23AP73-201ENST00000492507 471 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC119751.4-201ENST00000507498 357 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 NPM1P21-201ENST00000513394 762 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 RNU6-1102P-201ENST00000516149 96 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 RN7SKP157-201ENST00000516174 282 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 VTA1P2-201ENST00000520205 911 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 GTF2IP11-201ENST00000526931 420 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC113192.3-201ENST00000529152 742 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC233702.9-201ENST00000581528 203 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC008759.1-201ENST00000589783 983 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 ZNF92P2-201ENST00000600543 1059 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 ABI1P1-201ENST00000603375 1120 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AL391834.2-201ENST00000609982 546 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC025016.1-201ENST00000616746 682 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC016957.2-201ENST00000616998 848 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AL049777.1-201ENST00000622740 518 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC007546.2-201ENST00000623996 360 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 MAPK10-286ENST00000641208 8747 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 AC120036.2-201ENST00000509729 1474 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
SIX2Q9NPC8 MFSD8-216ENST00000641147 4009 ntBASIC4.81□□□□□ -1.64
SIX2Q9NPC8 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 MAPK10-349ENST00000641767 3661 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 RASA1-205ENST00000512763 3060 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 GHR-211ENST00000618088 4491 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 SNORA63.3-201ENST00000362682 132 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 RNU6-609P-201ENST00000365459 107 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 MIR620-201ENST00000385232 95 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 TRAV21-201ENST00000390449 343 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 RPL21P108-201ENST00000413857 481 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 DPPA2P2-201ENST00000418220 897 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 GNG5P5-201ENST00000420444 220 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 REREP1Y-201ENST00000422655 198 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 RPS12P10-201ENST00000427031 377 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 MTCO1P51-201ENST00000427672 1060 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 USP9YP9-201ENST00000429406 715 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 REREP2Y-201ENST00000439103 200 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 UBE2V1P3-201ENST00000439651 417 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AL513321.1-201ENST00000441175 761 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AC011753.3-201ENST00000443436 406 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 MTND6P32-201ENST00000457611 483 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AL512303.1-201ENST00000458693 465 ntTSL 3 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 C1GALT1P2-201ENST00000510813 1104 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AC010374.2-201ENST00000512933 535 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 MTATP6P9-201ENST00000515039 680 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 LINC01495-201ENST00000532380 421 ntTSL 2 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AC087636.1-201ENST00000554787 573 ntTSL 4 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AP005262.1-201ENST00000582646 997 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AC012213.4-201ENST00000606457 354 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AL353600.1-201ENST00000608148 251 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AC100847.1-201ENST00000611316 481 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AL049539.1-201ENST00000611964 459 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AL121890.2-201ENST00000617644 465 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AC097460.3-201ENST00000623099 442 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 AC006065.6-201ENST00000625201 545 ntBASIC4.8□□□□□ -1.64
SIX2Q9NPC8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
SIX2Q9NPC8 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SIX2Q9NPC8 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
SIX2Q9NPC8 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
SIX2Q9NPC8 AL078595.2-201ENST00000605309 1780 ntBASIC4.79□□□□□ -1.64
SIX2Q9NPC8 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms