Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 UBTFL9-201ENST00000534504 1148 ntBASIC5.42□□□□□ -1.54
UPF2Q9HAU5 DYNLL1P4-201ENST00000549314 266 ntBASIC5.42□□□□□ -1.54
UPF2Q9HAU5 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC5.42□□□□□ -1.54
UPF2Q9HAU5 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC5.42□□□□□ -1.54
UPF2Q9HAU5 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.42□□□□□ -1.54
UPF2Q9HAU5 OR1AB1P-201ENST00000585564 761 ntBASIC5.42□□□□□ -1.54
UPF2Q9HAU5 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.42□□□□□ -1.54
UPF2Q9HAU5 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
UPF2Q9HAU5 AC144521.1-201ENST00000607148 956 ntBASIC5.42□□□□□ -1.54
UPF2Q9HAU5 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC5.42□□□□□ -1.54
UPF2Q9HAU5 AC074140.1-201ENST00000621617 208 ntBASIC5.42□□□□□ -1.54
UPF2Q9HAU5 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC5.42□□□□□ -1.54
UPF2Q9HAU5 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.42□□□□□ -1.54
UPF2Q9HAU5 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
UPF2Q9HAU5 CDC27P2-201ENST00000425026 1922 ntBASIC5.42□□□□□ -1.54
UPF2Q9HAU5 AL590763.1-201ENST00000398297 1545 ntBASIC5.42□□□□□ -1.54
UPF2Q9HAU5 MTCO1P11-201ENST00000429111 1528 ntBASIC5.42□□□□□ -1.54
UPF2Q9HAU5 AC024341.1-201ENST00000526444 1552 ntBASIC5.42□□□□□ -1.54
UPF2Q9HAU5 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC027228.2-201ENST00000567141 2154 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 OR1F12-201ENST00000402365 945 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 RN7SKP273-201ENST00000411392 314 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC096711.3-201ENST00000420721 582 ntTSL 4 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 ABCF2P2-201ENST00000450549 296 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 MTND2P39-201ENST00000457230 764 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC018638.3-201ENST00000461273 132 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 MTND3P3-201ENST00000505004 126 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC011411.1-201ENST00000509592 876 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 HMGB3P13-201ENST00000511263 607 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 HAUS8P1-201ENST00000549005 542 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC122134.1-202ENST00000569111 1201 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AC022387.2-201ENST00000604050 448 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 STATH-208ENST00000615994 598 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 AL138960.2-201ENST00000625145 535 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 CGA-206ENST00000630630 832 ntTSL 2 BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 LINC01808-202ENST00000641680 1116 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 KARSP3-201ENST00000571212 1504 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 MFSD8-242ENST00000641690 4199 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
UPF2Q9HAU5 MTND4P26-201ENST00000415971 1359 ntBASIC5.41□□□□□ -1.54
UPF2Q9HAU5 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.4□□□□□ -1.54
UPF2Q9HAU5 AL133243.3-201ENST00000617415 3004 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC5.4□□□□□ -1.54
UPF2Q9HAU5 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.54
UPF2Q9HAU5 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.4□□□□□ -1.54
UPF2Q9HAU5 RNA5SP305-201ENST00000362665 119 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 SNORA51.1-201ENST00000363243 140 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 MIR1911-201ENST00000410783 80 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC5.4□□□□□ -1.54
UPF2Q9HAU5 VN1R31P-201ENST00000417498 730 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 BX510359.2-201ENST00000417920 305 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 RBMY1KP-201ENST00000423480 476 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC5.4□□□□□ -1.54
UPF2Q9HAU5 ELOCP18-201ENST00000434209 337 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.4□□□□□ -1.54
UPF2Q9HAU5 RNA5SP92-201ENST00000516437 110 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 SOX5P1-201ENST00000524155 1127 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 AC008033.2-201ENST00000542626 177 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC5.4□□□□□ -1.54
UPF2Q9HAU5 AC069437.1-201ENST00000551372 512 ntTSL 4 BASIC5.4□□□□□ -1.54
UPF2Q9HAU5 EDDM3DP-201ENST00000554692 434 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC5.4□□□□□ -1.54
UPF2Q9HAU5 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
UPF2Q9HAU5 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC5.4□□□□□ -1.54
UPF2Q9HAU5 AP000240.1-201ENST00000609910 452 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 AC253576.2-201ENST00000618815 580 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 AC019278.1-201ENST00000623516 479 ntBASIC5.4□□□□□ -1.54
UPF2Q9HAU5 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.55
UPF2Q9HAU5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC5.4□□□□□ -1.55
UPF2Q9HAU5 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
UPF2Q9HAU5 AC097504.1-201ENST00000515103 2415 ntBASIC5.39□□□□□ -1.55
UPF2Q9HAU5 THAP12P8-201ENST00000447914 2115 ntBASIC5.39□□□□□ -1.55
UPF2Q9HAU5 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC5.39□□□□□ -1.55
UPF2Q9HAU5 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
UPF2Q9HAU5 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
UPF2Q9HAU5 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC5.39□□□□□ -1.55
UPF2Q9HAU5 AL592182.3-201ENST00000642132 3304 ntBASIC5.39□□□□□ -1.55
UPF2Q9HAU5 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
UPF2Q9HAU5 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms