Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC005962.2-201ENST00000611427 652 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 CR381653.2-201ENST00000624041 768 ntBASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 BANCR-201ENST00000624238 473 ntTSL 2 BASIC5.4□□□□□ -1.54
SEC61A2Q9H9S3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 EEF1A1P14-201ENST00000421195 1376 ntBASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
SEC61A2Q9H9S3 UGT2B17-201ENST00000317746 2077 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 CR383658.2-201ENST00000547576 1525 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC004656.1-201ENST00000568479 4951 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 TMSB4XP2-201ENST00000335179 210 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 RN7SKP226-201ENST00000364912 300 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 Y_RNA.302-201ENST00000364997 102 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 RPL23AP39-201ENST00000415533 405 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 MTCO3P1-205ENST00000422088 832 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 MTND1P14-201ENST00000427400 950 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 USP12PX-201ENST00000432383 1057 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 BTF3P10-201ENST00000433415 495 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AL512286.1-201ENST00000439244 400 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 RPL5P7-201ENST00000444235 813 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 DNAJC19P8-201ENST00000452887 259 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 RPL30P9-201ENST00000465586 330 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC109462.1-201ENST00000491087 368 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 RPL9P6-201ENST00000492764 598 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 SETP14-201ENST00000497538 873 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC008945.1-201ENST00000505144 499 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 CA1-215ENST00000522389 551 ntTSL 3 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AP002453.2-201ENST00000533503 320 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 PSMB7P1-201ENST00000556349 514 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AL354740.1-205ENST00000586413 1230 ntTSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC008945.2-201ENST00000606056 604 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 STMN1P1-201ENST00000617809 440 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AL512652.1-201ENST00000619006 500 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 MDN1-201ENST00000369393 18413 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AL354854.1-201ENST00000455940 1363 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 AL354685.2-201ENST00000448218 1447 ntBASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 EED-206ENST00000527888 1422 ntTSL 2 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
SEC61A2Q9H9S3 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
SEC61A2Q9H9S3 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms