Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 RNA5SP514-201ENST00000363717 111 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 RNU5E-5P-201ENST00000365379 116 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AL031679.1-201ENST00000400616 525 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 MIR1282-201ENST00000408865 101 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 FTO-202ENST00000431610 707 ntTSL 3 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 PSMD10P2-201ENST00000432890 672 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 CEACAMP1-201ENST00000434624 1035 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 RPS24P1-201ENST00000438550 371 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC090453.1-201ENST00000495560 436 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 RNU6-720P-201ENST00000516363 108 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 RN7SKP82-201ENST00000516786 223 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 IGHV4-55-201ENST00000520889 368 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 MTND4LP18-201ENST00000526864 291 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC002310.3-201ENST00000569728 723 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 RN7SL802P-201ENST00000577858 299 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 MIR4701-201ENST00000583094 63 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC073648.5-201ENST00000603502 305 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 SEPT7P9-203ENST00000604116 343 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AL136363.2-201ENST00000604173 851 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC073046.2-201ENST00000604756 527 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC097468.3-201ENST00000607956 456 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 CYP3A51P-201ENST00000633513 256 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC011978.2-201ENST00000569835 2054 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AL022323.4-201ENST00000623980 13120 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 AC062022.1-201ENST00000451026 1684 ntBASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
TRAIPQ9BWF2 OR11H5P-202ENST00000641612 1325 ntBASIC7.02□□□□□ -1.28
TRAIPQ9BWF2 OR52N1-202ENST00000641645 2545 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 QRSL1P1-201ENST00000400977 1540 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AP000473.2-201ENST00000602659 1537 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC022034.1-201ENST00000512867 2156 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 PDE4B-203ENST00000371045 3982 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 KIAA0895-201ENST00000297063 4153 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 RNU6-289P-201ENST00000364093 107 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 ARF4P3-201ENST00000397387 509 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AL157702.1-201ENST00000398764 426 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 MIR1305-201ENST00000408300 86 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AL358176.3-201ENST00000420757 454 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AL451136.1-201ENST00000435399 325 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 MTND1P28-201ENST00000435623 950 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 LSM1P1-201ENST00000438629 273 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 CXCR2P1-202ENST00000443392 1074 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC087312.1-201ENST00000471411 480 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AP002884.1-201ENST00000479691 655 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC108941.1-201ENST00000502853 530 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 BNIP3P41-201ENST00000503774 571 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AL117351.2-201ENST00000513571 157 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 IGHV3-32-201ENST00000519182 355 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 IGHV3-57-201ENST00000520143 280 ntBASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 CASC19-203ENST00000523510 575 ntTSL 3 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 AL157871.6-201ENST00000553954 206 ntTSL 2 BASIC7.02□□□□□ -1.29
TRAIPQ9BWF2 TPRX1P1-201ENST00000557620 319 ntBASIC7.02□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms