Protein–RNA interactions for Protein: Q96RL7

VPS13A, Vacuolar protein sorting-associated protein 13A, humanhuman

Predictions only

Length 3,174 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13AQ96RL7 IGF1-206ENST00000456098 7370 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 ZC3H13-202ENST00000282007 6412 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 AC233263.6-201ENST00000631132 1963 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 RPL37-201ENST00000274242 7686 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 RNA5SP453-201ENST00000362503 119 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 SNORA70.6-201ENST00000383934 134 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 MTND4LP20-201ENST00000402379 270 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 MIR1251-201ENST00000408552 70 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 RHEBP2-201ENST00000450289 600 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 RPL23AP53-201ENST00000521854 457 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 AC244505.7-201ENST00000599675 272 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 U3.45-201ENST00000607547 219 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 RN7SKP182-201ENST00000410772 298 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 CKS1BP6-201ENST00000424932 240 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 AC069304.1-201ENST00000491593 704 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 OR5B10P-201ENST00000532869 642 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.08□□□□□ -1.76
VPS13AQ96RL7 AC010201.1-201ENST00000605051 540 ntBASIC4.08□□□□□ -1.76
VPS13AQ96RL7 AC083899.2-201ENST00000423285 1376 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 AC100778.3-201ENST00000580060 1750 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 DDX18P5-201ENST00000534547 1306 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 AC113146.2-201ENST00000560743 1961 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 PSD3-203ENST00000428502 6330 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 ACEA_U3.1-201ENST00000363057 217 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 SETP14-201ENST00000497538 873 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 Z98200.1-201ENST00000607298 470 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 AL136164.3-201ENST00000624429 3978 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 AL590806.1-201ENST00000415818 853 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 AC093166.2-201ENST00000455969 1017 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 AC105031.1-201ENST00000518550 476 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 ZNF532-214ENST00000589288 5585 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 AL021877.2-201ENST00000624442 10684 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
VPS13AQ96RL7 AC092376.2-201ENST00000622621 4116 ntBASIC4.07□□□□□ -1.76
VPS13AQ96RL7 AL449283.1-201ENST00000602631 3403 ntBASIC4.06□□□□□ -1.76
VPS13AQ96RL7 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 BTF3P6-201ENST00000448054 499 ntBASIC4.06□□□□□ -1.76
VPS13AQ96RL7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 MTCO3P22-201ENST00000603219 784 ntBASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 CHD8-201ENST00000399982 8229 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 CSNK1A1P1-202ENST00000563423 981 ntBASIC4.06□□□□□ -1.76
VPS13AQ96RL7 MIR6715A-201ENST00000615929 79 ntBASIC4.06□□□□□ -1.76
VPS13AQ96RL7 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 ZNF479-203ENST00000620639 1239 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 EIF2AK3-203ENST00000419748 4222 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 NBPF8-201ENST00000583271 5330 ntBASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AC239868.2-201ENST00000564237 4527 ntBASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AMPD1-203ENST00000520113 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 NXPH1-205ENST00000602349 1953 ntBASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AL391219.1-201ENST00000422570 483 ntBASIC4.06□□□□□ -1.76
VPS13AQ96RL7 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.06□□□□□ -1.76
VPS13AQ96RL7 AP000563.1-201ENST00000490865 758 ntBASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 100.1 ms