Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 ISCUP1-201ENST00000454451 448 ntBASIC4.73□□□□□ -1.65
RPRD1AQ96P16 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 AK3P4-201ENST00000504283 583 ntBASIC4.73□□□□□ -1.65
RPRD1AQ96P16 AK4P6-201ENST00000505168 528 ntBASIC4.73□□□□□ -1.65
RPRD1AQ96P16 AC134698.5-201ENST00000519444 336 ntBASIC4.73□□□□□ -1.65
RPRD1AQ96P16 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 AC079075.1-201ENST00000559543 878 ntBASIC4.73□□□□□ -1.65
RPRD1AQ96P16 LINC00904-201ENST00000604453 471 ntTSL 2 BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 AL133243.1-201ENST00000614487 366 ntBASIC4.73□□□□□ -1.65
RPRD1AQ96P16 BX005019.1-201ENST00000561881 1810 ntBASIC4.73□□□□□ -1.65
RPRD1AQ96P16 AC139713.2-215ENST00000641428 5037 ntBASIC4.73□□□□□ -1.65
RPRD1AQ96P16 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.73□□□□□ -1.65
RPRD1AQ96P16 AL132640.2-201ENST00000559968 1698 ntBASIC4.73□□□□□ -1.65
RPRD1AQ96P16 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.73□□□□□ -1.65
RPRD1AQ96P16 AC108751.5-201ENST00000492880 1336 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 MAPK10-304ENST00000641341 3984 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AL121834.1-202ENST00000404494 277 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 TRIM60P17-201ENST00000415181 719 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 CENPIP1-201ENST00000425713 902 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 RPS12P10-201ENST00000427031 377 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC004875.1-201ENST00000432702 378 ntTSL 3 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AL353597.2-202ENST00000434901 373 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 YWHAZP2-201ENST00000440317 728 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 HNRNPDLP3-201ENST00000456745 380 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 RPL5P30-201ENST00000465511 891 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC096741.1-201ENST00000472250 846 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC006463.2-201ENST00000473326 348 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 LARP7P4-201ENST00000481075 878 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 RN7SL459P-201ENST00000481078 302 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC135457.1-201ENST00000503553 664 ntTSL 3 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 RNU6-319P-201ENST00000516025 108 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC109635.6-201ENST00000525487 1113 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC015912.2-201ENST00000571053 181 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC020915.5-201ENST00000596836 964 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC019193.2-201ENST00000610012 634 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC100847.1-201ENST00000611316 481 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 AC074387.1-201ENST00000632044 823 ntTSL 2 BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 BMS1P21-201ENST00000634565 365 ntBASIC4.72□□□□□ -1.65
RPRD1AQ96P16 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
RPRD1AQ96P16 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.71□□□□□ -1.65
RPRD1AQ96P16 AC010300.1-201ENST00000600671 5134 ntBASIC4.71□□□□□ -1.65
RPRD1AQ96P16 IFI44L-201ENST00000370751 5874 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
RPRD1AQ96P16 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 RAG2-209ENST00000618712 2818 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 SNRPB2-202ENST00000377943 1588 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 AL592148.3-201ENST00000608771 2646 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 AC010132.2-201ENST00000295493 1043 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 AC007064.3-201ENST00000422608 359 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 AC093084.1-201ENST00000424233 687 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 MTND4LP13-201ENST00000425022 298 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 RPL21P43-201ENST00000425440 472 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 RPL23AP93-201ENST00000440847 484 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 TPT1P13-201ENST00000449760 499 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 MTND2P28-201ENST00000457540 1044 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 AC008676.3-201ENST00000521237 435 ntBASIC4.71□□□□□ -1.66
RPRD1AQ96P16 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 AC105020.2-201ENST00000564683 572 ntTSL 5 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.71□□□□□ -1.66
RPRD1AQ96P16 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms