Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 MIR5699-201ENST00000578903 90 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 NF1P5-201ENST00000588287 448 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC005972.3-201ENST00000606304 481 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC097505.1-201ENST00000610199 565 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AL645927.2-201ENST00000618350 349 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 U6.48-201ENST00000618523 106 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC090617.9-201ENST00000623751 147 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 C4BPAP1-201ENST00000415474 1893 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AL592437.2-201ENST00000421655 2434 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AC092162.3-201ENST00000624511 1624 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 AL133268.1-201ENST00000405676 1401 ntBASIC4.72□□□□□ -1.65
PDLIM5Q96HC4 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PDLIM5Q96HC4 AP001273.1-201ENST00000624493 3152 ntBASIC4.71□□□□□ -1.65
PDLIM5Q96HC4 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
PDLIM5Q96HC4 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.71□□□□□ -1.65
PDLIM5Q96HC4 RNF6P1-201ENST00000444889 1784 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AC006042.3-201ENST00000454684 1469 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 RNU1-83P-201ENST00000363426 164 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 TATDN1P1-201ENST00000414123 891 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 RPL23AP27-201ENST00000415161 451 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 RPL7P57-201ENST00000423238 740 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 CEACAMP7-201ENST00000444105 496 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 TRY2P-201ENST00000448860 689 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AP000942.1-201ENST00000463969 747 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 RN7SL629P-201ENST00000489622 285 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 SNORA31.13-201ENST00000516624 135 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AF186190.1-201ENST00000517470 480 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 HAUS1P3-201ENST00000523909 662 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 GCSHP4-201ENST00000538792 439 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 HMGN2P6-201ENST00000551091 273 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AC011477.5-201ENST00000586571 259 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AC022726.1-201ENST00000587475 207 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 ADAD1P2-201ENST00000588476 646 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 OR4H6P-202ENST00000603819 340 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AC018618.2-201ENST00000604770 446 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 IMMP1LP1-201ENST00000605170 488 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AC017076.1-201ENST00000607613 578 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AC015804.1-201ENST00000622935 435 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 LDHA-225ENST00000625635 141 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 AC091948.2-201ENST00000636510 279 ntBASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 LINC01249-201ENST00000412134 2663 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.71□□□□□ -1.66
PDLIM5Q96HC4 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AL445487.1-201ENST00000415694 1580 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 INTS6P1-201ENST00000504674 2530 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 USP9YP4-201ENST00000424401 1745 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC005005.4-201ENST00000623789 16698 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 RN7SKP125-201ENST00000410481 302 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC007559.1-201ENST00000428736 355 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 PTP4A1P3-201ENST00000433661 420 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 PRPF38AP2-201ENST00000438179 851 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AC097499.1-201ENST00000444277 208 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 RPL23AP23-201ENST00000452590 471 ntBASIC4.7□□□□□ -1.66
PDLIM5Q96HC4 AURKAPS2-201ENST00000454983 333 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms