Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC5.8□□□□□ -1.48
HPS3Q969F9 AC090888.2-201ENST00000559765 1144 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.8□□□□□ -1.48
HPS3Q969F9 MTND3P13-201ENST00000574391 343 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC5.8□□□□□ -1.48
HPS3Q969F9 AC022884.2-201ENST00000578535 580 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 RN7SL708P-201ENST00000580952 299 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 PRPF19P1-201ENST00000584766 898 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 AC069307.1-201ENST00000602820 447 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 AL020997.3-201ENST00000602843 359 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 VN1R7P-201ENST00000619242 903 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 AC068057.2-201ENST00000624047 895 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.8□□□□□ -1.48
HPS3Q969F9 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HPS3Q969F9 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HPS3Q969F9 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HPS3Q969F9 ZNF573-217ENST00000590414 2225 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HPS3Q969F9 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
HPS3Q969F9 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.8□□□□□ -1.48
HPS3Q969F9 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
HPS3Q969F9 MTND4P10-201ENST00000446199 1363 ntBASIC5.8□□□□□ -1.48
HPS3Q969F9 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
HPS3Q969F9 AC092747.4-201ENST00000620519 1861 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 HAT1-201ENST00000264108 1626 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 AC002525.1-201ENST00000624392 1622 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
HPS3Q969F9 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 U3.3-201ENST00000362986 216 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 RNU6-317P-201ENST00000384031 107 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 SYCP3-202ENST00000392924 845 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 FCF1P5-201ENST00000406490 482 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 NPM1P4-201ENST00000414095 812 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC5.79□□□□□ -1.48
HPS3Q969F9 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.79□□□□□ -1.48
HPS3Q969F9 RPF2P1-201ENST00000424137 906 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC5.79□□□□□ -1.48
HPS3Q969F9 NPM1P22-201ENST00000427761 952 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 AP001324.1-201ENST00000428553 399 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AP000936.3-201ENST00000438127 255 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 PARGP1-202ENST00000440803 790 ntTSL 2 BASIC5.79□□□□□ -1.48
HPS3Q969F9 PRPF38AP1-201ENST00000451976 933 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 XACT-201ENST00000468762 497 ntTSL 5 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AP000797.2-201ENST00000475768 606 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC5.79□□□□□ -1.48
HPS3Q969F9 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AC138832.1-201ENST00000522871 556 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.79□□□□□ -1.48
HPS3Q969F9 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
HPS3Q969F9 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AC023050.2-201ENST00000544968 387 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 OR11J2P-201ENST00000555298 907 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC5.79□□□□□ -1.48
HPS3Q969F9 MTND4LP24-201ENST00000572277 291 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 MIR4489-201ENST00000578869 62 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 AC061975.8-201ENST00000587058 721 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 VN1R84P-201ENST00000593697 235 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 AC006272.2-201ENST00000594725 163 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 VN1R88P-201ENST00000596787 292 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.79□□□□□ -1.48
HPS3Q969F9 SUMO2P15-201ENST00000604285 278 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 AC016877.3-201ENST00000606778 504 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AC231759.1-201ENST00000616455 597 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 AL442125.2-201ENST00000619338 418 ntTSL 5 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AC048344.4-201ENST00000619744 527 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 WWOX-217ENST00000620008 450 ntTSL 2 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AP002791.1-201ENST00000623291 381 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC5.79□□□□□ -1.48
HPS3Q969F9 LINC02211-204ENST00000642024 1070 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC5.79□□□□□ -1.48
HPS3Q969F9 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC5.79□□□□□ -1.48
HPS3Q969F9 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
HPS3Q969F9 DSPP-202ENST00000399271 4331 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
HPS3Q969F9 AC138393.1-206ENST00000540997 1886 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 HSPA8P17-201ENST00000427029 1382 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 MTND4P8-201ENST00000514997 1362 ntBASIC5.79□□□□□ -1.48
HPS3Q969F9 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
HPS3Q969F9 GVINP1-202ENST00000531871 7271 ntBASIC5.78□□□□□ -1.48
HPS3Q969F9 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.78□□□□□ -1.48
HPS3Q969F9 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
HPS3Q969F9 AC011493.1-201ENST00000596753 1632 ntBASIC5.78□□□□□ -1.48
HPS3Q969F9 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
HPS3Q969F9 RNF6P1-201ENST00000444889 1784 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms