Protein–RNA interactions for Protein: Q8NHV4

NEDD1, Protein NEDD1, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1Q8NHV4 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 AL034370.1-201ENST00000397254 1590 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 OR5P1P-201ENST00000299512 925 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 RNU105B-201ENST00000364478 208 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 AL356432.1-201ENST00000405809 419 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 XKRYP4-201ENST00000414395 483 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 RPS15AP30-201ENST00000420976 390 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 AC016691.1-201ENST00000441321 413 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 XKRYP5-201ENST00000449659 483 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 AC115223.1-201ENST00000466377 870 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 RN7SKP13-201ENST00000515933 244 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 AP001893.2-201ENST00000526949 202 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 AC027026.1-201ENST00000532323 742 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 AC011497.2-201ENST00000600255 639 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 AC245014.3-201ENST00000618589 347 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 AC119674.1-207ENST00000641355 633 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 DOCK11P1-201ENST00000553480 5932 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 EEF1A1P30-201ENST00000429708 1315 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 CLSTN2-201ENST00000458420 14202 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 AOX3P-204ENST00000491025 2107 ntBASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.18□□□□□ -1.26
NEDD1Q8NHV4 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 CLCN3-211ENST00000613795 5874 ntTSL 5 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 OXCT1-206ENST00000512084 1593 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 Y_RNA.67-201ENST00000362870 100 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 SNORD56.2-201ENST00000363242 71 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 Y_RNA.431-201ENST00000384086 102 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 Y_RNA.459-201ENST00000384251 102 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 MTATP6P29-201ENST00000415057 132 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 RPL12P12-201ENST00000424633 501 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 TIMM9P3-201ENST00000428659 274 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 RPL12P11-201ENST00000439970 501 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 BRK1P2-201ENST00000442875 223 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC005077.1-201ENST00000449226 375 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC094085.1-201ENST00000468914 584 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 RN7SL165P-201ENST00000477476 291 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 RNU6ATAC39P-201ENST00000516309 149 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 snoZ278.1-201ENST00000517059 112 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 RGS4-207ENST00000527809 817 ntTSL 4 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 DPPA3P2-201ENST00000553589 478 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AL355375.2-201ENST00000574825 175 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC090236.2-201ENST00000587933 1101 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 AC020916.2-201ENST00000591242 360 ntBASIC7.17□□□□□ -1.26
NEDD1Q8NHV4 BNIP3P10-201ENST00000605360 577 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms