Protein–RNA interactions for Protein: Q8NF91

SYNE1, Nesprin-1, humanhuman

Known RBP Predictions only

Length 8,797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1Q8NF91 AC092647.1-201ENST00000420654 287 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC079168.2-201ENST00000453977 416 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 CYCSP34-201ENST00000458172 304 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 LINC00973-201ENST00000473756 962 ntTSL 2 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 LINC00903-201ENST00000497854 223 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 RNA5SP360-201ENST00000516555 118 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 WDR61-205ENST00000558459 884 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 RN7SKP224-201ENST00000364140 325 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AL136368.1-201ENST00000416249 401 ntTSL 2 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AL136231.1-201ENST00000429407 730 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC017100.2-201ENST00000584628 355 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 TTN-AS1-245ENST00000592182 749 ntTSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC004777.1-201ENST00000624317 287 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC019072.1-201ENST00000604535 1551 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 SCN1A-209ENST00000635750 8299 ntAPPRIS P3 TSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 RNA5SP366-201ENST00000365454 123 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 RNA5SP187-201ENST00000384400 119 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 RN7SL810P-201ENST00000493031 276 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 RNU6-513P-201ENST00000516104 104 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 CYCSP40-201ENST00000575927 294 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AP001160.4-201ENST00000596971 382 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 FAM27B-201ENST00000610601 213 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC138965.3-201ENST00000623875 498 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 RNA5SP28-201ENST00000363841 119 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 RNA5SP241-201ENST00000391326 114 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 RPL36AP36-201ENST00000418616 301 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 HSPE1P16-201ENST00000426640 348 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AL157385.1-201ENST00000446973 268 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 AC020915.5-201ENST00000596836 964 ntBASIC1.37□□□□□ -2.19
SYNE1Q8NF91 LGI1-209ENST00000627699 664 ntTSL 3 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 CLEC12A-205ENST00000434319 1515 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC1.37□□□□□ -2.19
SYNE1Q8NF91 TMEM255A-202ENST00000371352 2879 ntTSL 2 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AL590240.1-201ENST00000334118 313 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 FABP7P1-201ENST00000424004 391 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC016772.1-201ENST00000444170 1261 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RNU1-6P-201ENST00000516290 144 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC106782.4-201ENST00000568264 210 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 MIR3158-1-201ENST00000583596 81 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC023762.1-201ENST00000603280 584 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC018816.2-201ENST00000621460 353 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AL136084.2-203ENST00000630758 690 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RN7SKP263-201ENST00000411194 309 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC093166.2-201ENST00000455969 1017 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 LINC00535-203ENST00000520096 790 ntTSL 3 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 DYNLL1P4-201ENST00000549314 266 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 FKBP1BP1-201ENST00000553366 325 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC010503.3-201ENST00000594355 540 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 IGKV2OR2-2-201ENST00000605025 300 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 ACTR3BP5-201ENST00000448440 1479 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC083843.3-201ENST00000623679 2186 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 RNA5SP307-201ENST00000362863 116 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC1.36□□□□□ -2.19
SYNE1Q8NF91 CYCSP19-201ENST00000411715 316 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 AC008280.1-201ENST00000418851 412 ntBASIC1.36□□□□□ -2.19
SYNE1Q8NF91 LINC01889-201ENST00000430692 668 ntTSL 5 BASIC1.36□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 144.4 ms