Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AC027281.1-201ENST00000574178 758 ntBASIC3.15□□□□□ -1.91
SCXQ7RTU7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 VN1R84P-201ENST00000593697 235 ntBASIC3.15□□□□□ -1.91
SCXQ7RTU7 CERS6-AS1-204ENST00000599361 536 ntTSL 4 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 AC020910.3-201ENST00000603701 874 ntBASIC3.15□□□□□ -1.91
SCXQ7RTU7 MIR378J-201ENST00000611988 109 ntBASIC3.15□□□□□ -1.91
SCXQ7RTU7 AL590410.1-201ENST00000617925 333 ntBASIC3.15□□□□□ -1.91
SCXQ7RTU7 AL133370.2-201ENST00000619934 439 ntBASIC3.15□□□□□ -1.91
SCXQ7RTU7 AJ009632.2-207ENST00000634659 527 ntTSL 5 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC3.15□□□□□ -1.91
SCXQ7RTU7 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SCXQ7RTU7 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SCXQ7RTU7 DLD-204ENST00000437604 1859 ntTSL 2 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SCXQ7RTU7 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
SCXQ7RTU7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3.15□□□□□ -1.91
SCXQ7RTU7 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SCXQ7RTU7 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SCXQ7RTU7 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SCXQ7RTU7 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCXQ7RTU7 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCXQ7RTU7 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCXQ7RTU7 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCXQ7RTU7 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCXQ7RTU7 CREM-201ENST00000337656 900 ntAPPRIS ALT1 TSL 5 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 RNA5SP505-201ENST00000364748 108 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AL035079.1-201ENST00000405210 287 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 RPL31P52-201ENST00000407532 367 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AL603766.1-201ENST00000407763 664 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 RN7SKP100-201ENST00000411258 284 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 GTF2IP5-201ENST00000414608 731 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC004074.1-201ENST00000421810 1063 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 IGKV1OR9-1-201ENST00000424370 284 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 NDUFA5P1-201ENST00000433858 341 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 MTCYBP29-201ENST00000436327 1006 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 ELOCP3-201ENST00000439303 348 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC004980.3-201ENST00000447046 365 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AL157884.3-201ENST00000448273 1184 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 MORF4L1P4-201ENST00000450245 976 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 FGF7P3-201ENST00000454645 303 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 EIF4A2P4-201ENST00000458691 1196 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 CREM-230ENST00000474931 626 ntTSL 2 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 RPL23AP37-201ENST00000479658 549 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 RPL23AP72-201ENST00000492447 435 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 ARL4AP1-201ENST00000503220 705 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 PRELID3BP7-201ENST00000503606 469 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 EGFLAM-AS3-201ENST00000505267 549 ntTSL 5 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 TCP11X3P-202ENST00000514289 1254 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC117525.1-201ENST00000515228 503 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC012339.2-201ENST00000523996 453 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 MORF4L1P3-201ENST00000525966 950 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AP006289.1-201ENST00000538089 277 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AP001880.2-201ENST00000538233 448 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC015727.1-201ENST00000572792 512 ntTSL 5 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 UBA2-208ENST00000592791 910 ntTSL 2 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC010680.3-201ENST00000604215 520 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AL391358.1-201ENST00000605342 190 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC138473.1-201ENST00000605717 526 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 NAA60-237ENST00000615865 326 ntTSL 5 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 MIR6810-201ENST00000622701 70 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 ATL2-217ENST00000629272 1242 ntTSL 5 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 AL596275.2-204ENST00000641628 552 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 AL596275.2-206ENST00000641957 626 ntBASIC3.14□□□□□ -1.91
SCXQ7RTU7 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC3.14□□□□□ -1.91
SCXQ7RTU7 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SCXQ7RTU7 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms