Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
FOXR1Q6PIV2 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 ATP5BP1-201ENST00000411980 1574 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AL353753.1-201ENST00000612217 2320 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 RNA5SP114-201ENST00000363780 113 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 Y_RNA.259-201ENST00000364619 101 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 Y_RNA.315-201ENST00000365117 102 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 PFKFB1-201ENST00000374992 1156 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 U8.14-201ENST00000390843 143 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 RPL7P58-201ENST00000402913 758 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 MIR1266-201ENST00000408125 84 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 RNA5SP280-201ENST00000411230 115 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC073115.2-201ENST00000416708 555 ntTSL 4 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC016716.2-201ENST00000418621 486 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 MTCYBP8-201ENST00000422855 651 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 RIMKLBP2-201ENST00000424737 654 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC083855.1-201ENST00000440041 258 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 RPL23AP20-201ENST00000447965 421 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC091564.1-201ENST00000464563 479 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC027575.1-201ENST00000481064 460 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC012158.1-202ENST00000482431 1132 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AL591122.1-201ENST00000487348 492 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC108064.1-201ENST00000513791 460 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 RNU6-1170P-201ENST00000515974 106 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 RNA5SP278-201ENST00000517055 102 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 LY96-202ENST00000518893 430 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AP003034.1-201ENST00000534621 422 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC004817.2-201ENST00000561794 651 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC115286.1-201ENST00000604298 434 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC111186.1-201ENST00000604684 130 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC009779.8-202ENST00000607990 932 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AC097381.3-201ENST00000608962 462 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 CLUHP10-201ENST00000631979 980 ntBASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 PUM1-206ENST00000426105 4043 ntAPPRIS ALT1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 UEVLD-202ENST00000320750 1799 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC6.95□□□□□ -1.3
FOXR1Q6PIV2 CEP57-207ENST00000537677 1647 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 ZNF566-201ENST00000392170 2755 ntAPPRIS ALT2 TSL 5 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 SNTN-203ENST00000496807 3746 ntTSL 4 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 RN7SKP107-201ENST00000364157 290 ntBASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 ATP5EP2-201ENST00000381026 385 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 Y_RNA.452-201ENST00000384202 108 ntBASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 RNU6-1055P-201ENST00000391085 107 ntBASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 RNA5SP53-201ENST00000391299 120 ntBASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 RN7SKP188-201ENST00000410789 317 ntBASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 AC004690.1-201ENST00000418216 328 ntBASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 RPS26P13-201ENST00000419030 330 ntBASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 Z82198.3-201ENST00000421145 199 ntBASIC6.94□□□□□ -1.3
FOXR1Q6PIV2 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.94□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms