Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
RNF43Q68DV7 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.55□□□□□ -1.36
RNF43Q68DV7 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF43Q68DV7 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
RNF43Q68DV7 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
RNF43Q68DV7 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
RNF43Q68DV7 CR383658.2-201ENST00000547576 1525 ntBASIC6.55□□□□□ -1.36
RNF43Q68DV7 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RNF43Q68DV7 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
RNF43Q68DV7 LINC01720-201ENST00000413356 2216 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF43Q68DV7 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF43Q68DV7 AL157831.2-201ENST00000564681 3095 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 CUL4AP1-201ENST00000514750 1863 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 ZNF101P1-201ENST00000435701 1720 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF43Q68DV7 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF43Q68DV7 Y_RNA.89-201ENST00000363031 102 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 RNU5F-7P-201ENST00000363696 115 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 Y_RNA.394-201ENST00000383942 103 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 RNU6-780P-201ENST00000391030 104 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC007066.1-201ENST00000392902 381 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 AL356776.1-201ENST00000406574 447 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 AL512649.1-201ENST00000428997 581 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC079776.3-201ENST00000450665 370 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 RN7SL369P-201ENST00000477138 299 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 OR4D12P-201ENST00000509361 911 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 PANCR-202ENST00000513690 448 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 SNORA31.13-201ENST00000516624 135 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 IGKV1D-22-201ENST00000518953 324 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 AK6P1-201ENST00000540219 478 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 LINC02366-202ENST00000541949 696 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 PSMA3P-201ENST00000555485 635 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC087477.6-201ENST00000559595 843 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 MRPL57P1-201ENST00000621486 265 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC073348.1-201ENST00000623002 331 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC073488.6-201ENST00000632293 754 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 SAMMSON-227ENST00000642114 1199 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF43Q68DV7 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF43Q68DV7 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF43Q68DV7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF43Q68DV7 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
RNF43Q68DV7 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
RNF43Q68DV7 AC073055.1-201ENST00000456901 1621 ntBASIC6.54□□□□□ -1.36
RNF43Q68DV7 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.54□□□□□ -1.36
RNF43Q68DV7 MSL3P1-202ENST00000440028 1468 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC138393.1-206ENST00000540997 1886 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC093225.1-201ENST00000506867 1408 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 FRG1BP-201ENST00000278882 761 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 FRG1CP-201ENST00000358464 769 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 RNA5SP27-201ENST00000363839 119 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 RNU6-374P-201ENST00000364146 108 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 CALM2P3-201ENST00000400429 449 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 RPL23AP17-201ENST00000401064 499 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC079355.1-201ENST00000421770 223 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.53□□□□□ -1.36
RNF43Q68DV7 MTCO1P3-201ENST00000429327 192 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC073109.1-201ENST00000445066 978 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC010240.2-201ENST00000445363 1205 ntBASIC6.53□□□□□ -1.36
RNF43Q68DV7 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms