Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRK2Q5S007 E2F6P2-201ENST00000420708 748 ntBASIC3.8□□□□□ -1.8
LRRK2Q5S007 OR9M1P-201ENST00000459641 921 ntBASIC3.8□□□□□ -1.8
LRRK2Q5S007 ATP5G1P3-201ENST00000463301 410 ntBASIC3.8□□□□□ -1.8
LRRK2Q5S007 AC007991.1-201ENST00000522680 631 ntBASIC3.8□□□□□ -1.8
LRRK2Q5S007 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 AL161757.4-204ENST00000557136 834 ntTSL 3 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.8□□□□□ -1.8
LRRK2Q5S007 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
LRRK2Q5S007 MAPK10-286ENST00000641208 8747 ntBASIC3.8□□□□□ -1.8
LRRK2Q5S007 EIF3EP2-201ENST00000423042 1814 ntBASIC3.8□□□□□ -1.8
LRRK2Q5S007 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRK2Q5S007 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 KCNMB3P1-202ENST00000493696 3389 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRK2Q5S007 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRK2Q5S007 UBR5-204ENST00000518205 1931 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 RPS20P21-201ENST00000466859 343 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 MIR5685-201ENST00000579080 79 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 PRPF19P1-201ENST00000584766 898 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 ZNF66-203ENST00000594534 757 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 AC090181.2-201ENST00000602975 672 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 MIR6500-201ENST00000622700 86 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRK2Q5S007 AL034408.1-202ENST00000636088 415 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRK2Q5S007 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 ZNF484-201ENST00000332591 2836 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRK2Q5S007 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRK2Q5S007 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
LRRK2Q5S007 GTDC1-207ENST00000409298 2209 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
LRRK2Q5S007 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 TRAV25-201ENST00000390454 403 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 RN7SKP235-201ENST00000410662 305 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 AC092651.1-201ENST00000426110 312 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 RPL6P9-201ENST00000466502 859 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 AL136126.1-201ENST00000473603 402 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 TRIM36-IT1-201ENST00000503723 881 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 NPM1P21-201ENST00000513394 762 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 AC105999.1-201ENST00000518722 473 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 AC105233.3-201ENST00000531125 744 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 MAPK6PS2-201ENST00000379571 2060 ntBASIC3.79□□□□□ -1.8
LRRK2Q5S007 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC3.79□□□□□ -1.8
LRRK2Q5S007 C2orf16-201ENST00000408964 6200 ntAPPRIS P2 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 AL133243.3-201ENST00000617415 3004 ntBASIC3.78□□□□□ -1.8
LRRK2Q5S007 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 MTND6P5-201ENST00000448266 512 ntBASIC3.78□□□□□ -1.8
LRRK2Q5S007 RPS20P4-201ENST00000461659 355 ntBASIC3.78□□□□□ -1.8
LRRK2Q5S007 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 AC016745.2-201ENST00000608834 3443 ntBASIC3.78□□□□□ -1.8
LRRK2Q5S007 AURKA-208ENST00000395915 2114 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 ELF1-204ENST00000625359 2032 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 AP005432.1-201ENST00000580891 3485 ntBASIC3.78□□□□□ -1.8
LRRK2Q5S007 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 NUTM2B-AS1-213ENST00000619625 7611 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 SLC4A10-204ENST00000421911 3398 ntTSL 5 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 ADAM24P-201ENST00000398655 2101 ntBASIC3.78□□□□□ -1.8
LRRK2Q5S007 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.78□□□□□ -1.8
LRRK2Q5S007 MIR1289-1-201ENST00000408836 144 ntBASIC3.78□□□□□ -1.8
LRRK2Q5S007 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
LRRK2Q5S007 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms