Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 XIAPP3-201ENST00000312918 795 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 RNU1-15P-201ENST00000353977 144 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 RN7SKP95-201ENST00000362860 303 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 RNA5SP307-201ENST00000362863 116 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 RNU1-63P-201ENST00000383902 164 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 SNX10-204ENST00000409838 944 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 JKAMPP1-201ENST00000413804 919 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 RAD23BP1-201ENST00000421404 1227 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC007559.1-201ENST00000428736 355 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 CDY14P-201ENST00000431260 1014 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC097523.2-201ENST00000435551 652 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 CYCSP11-201ENST00000436426 315 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 ELOCP8-201ENST00000439309 332 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 CDY12P-201ENST00000440679 1015 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 ELOCP15-201ENST00000442090 332 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 CDY13P-201ENST00000445813 1015 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC108463.1-201ENST00000450258 347 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 CDY23P-201ENST00000451661 1014 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 UBA52P7-201ENST00000486088 380 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 RPL7P51-201ENST00000490532 749 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 RPL36AP41-201ENST00000493820 306 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 NIPA2P2-201ENST00000496376 1083 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 LINC02161-201ENST00000503691 420 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 USP9YP5-201ENST00000511770 630 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 RN7SKP147-201ENST00000517154 244 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 MORF4L1P3-201ENST00000525966 950 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AL109741.3-201ENST00000561748 592 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 RN7SL652P-201ENST00000577769 300 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC103792.1-201ENST00000603591 919 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AL512356.3-201ENST00000623005 461 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC112694.2-201ENST00000623697 768 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC004808.2-201ENST00000627965 773 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 EXOC5P1-201ENST00000510543 1969 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AC006971.1-201ENST00000407916 4486 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 AP000756.2-201ENST00000624168 2567 ntBASIC4.01□□□□□ -1.77
CCDC58Q4VC31 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CCDC58Q4VC31 MAPK10-263ENST00000641052 4307 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC58Q4VC31 AC009951.1-201ENST00000623674 2614 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC58Q4VC31 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC58Q4VC31 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
CCDC58Q4VC31 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC58Q4VC31 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4□□□□□ -1.77
CCDC58Q4VC31 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CCDC58Q4VC31 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
CCDC58Q4VC31 METTL5-202ENST00000308099 629 ntTSL 3 BASIC4□□□□□ -1.77
CCDC58Q4VC31 RNA5SP322-201ENST00000363617 119 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC58Q4VC31 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CCDC58Q4VC31 AC104297.1-201ENST00000393779 870 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 ESCO2-202ENST00000397418 720 ntTSL 5 BASIC4□□□□□ -1.77
CCDC58Q4VC31 CHMP1B2P-201ENST00000399581 597 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 IL6-206ENST00000407492 926 ntTSL 3 BASIC4□□□□□ -1.77
CCDC58Q4VC31 Z98941.1-201ENST00000407764 100 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4□□□□□ -1.77
CCDC58Q4VC31 SNORA74C-2-201ENST00000411179 201 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4□□□□□ -1.77
CCDC58Q4VC31 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC4□□□□□ -1.77
CCDC58Q4VC31 CHEK2P3-201ENST00000416118 248 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 AC140479.3-201ENST00000418944 1126 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC4□□□□□ -1.77
CCDC58Q4VC31 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4□□□□□ -1.77
CCDC58Q4VC31 AC112498.1-201ENST00000444401 332 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 DDX39BP2-208ENST00000453923 258 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 SNRPGP5-201ENST00000456003 220 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 BX284632.1-201ENST00000478218 541 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4□□□□□ -1.77
CCDC58Q4VC31 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4□□□□□ -1.77
CCDC58Q4VC31 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC4□□□□□ -1.77
CCDC58Q4VC31 HIGD1AP14-201ENST00000507617 282 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4□□□□□ -1.77
CCDC58Q4VC31 ATP5LP3-201ENST00000514223 304 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 SNORA70.14-201ENST00000516205 110 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4□□□□□ -1.77
CCDC58Q4VC31 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC4□□□□□ -1.77
CCDC58Q4VC31 GPATCH2L-203ENST00000553588 776 ntTSL 2 BASIC4□□□□□ -1.77
CCDC58Q4VC31 AC018552.3-201ENST00000567416 561 ntBASIC4□□□□□ -1.77
CCDC58Q4VC31 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms