Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 AC011755.1-201ENST00000623763 2049 ntBASIC5.3□□□□□ -1.56
SHROOM1Q2M3G4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AL731566.1-201ENST00000620490 1937 ntBASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 RMST-202ENST00000541282 2099 ntTSL 2 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 OR4K17-201ENST00000315543 1032 ntBASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 Z98745.1-201ENST00000402553 494 ntBASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AL080315.1-201ENST00000406055 466 ntBASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 SNX10-203ENST00000409367 746 ntTSL 5 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AL353597.2-202ENST00000434901 373 ntBASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 OR4C10P-201ENST00000434991 931 ntBASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AC092447.2-201ENST00000435487 669 ntBASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 HMGB3P9-201ENST00000441799 583 ntBASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AC025884.1-201ENST00000556034 378 ntBASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AL049875.1-202ENST00000556620 857 ntTSL 3 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 AP003497.2-201ENST00000624220 967 ntBASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 CPHL1P-201ENST00000461341 3407 ntBASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 MFSD8-220ENST00000641243 1422 ntBASIC5.29□□□□□ -1.56
SHROOM1Q2M3G4 HSPD1P11-201ENST00000508643 1702 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 BX005019.1-201ENST00000561881 1810 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 MIR331-201ENST00000362302 94 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 RNU1-132P-201ENST00000364300 164 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 RNU4-7P-201ENST00000364758 141 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 SNORA37-201ENST00000384504 129 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 GLS-204ENST00000409428 816 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 AC007738.1-201ENST00000413892 348 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 NPM1P26-201ENST00000426339 738 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 RPS6P2-201ENST00000454208 705 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 UBA52P3-201ENST00000491303 382 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 RNA5SP249-201ENST00000516127 99 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 RNA5SP230-201ENST00000517039 122 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 TMEM191C-213ENST00000545656 574 ntAPPRIS ALT2 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 AC009303.3-201ENST00000591103 736 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 AC015908.5-201ENST00000623289 343 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 AC011815.3-201ENST00000624194 473 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 ALB-201ENST00000295897 2263 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 CASC19-206ENST00000641028 1430 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 AC009229.4-201ENST00000623854 1947 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 CASC19-204ENST00000641001 2055 ntBASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
SHROOM1Q2M3G4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 RN7SKP97-201ENST00000410966 333 ntBASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 Z95327.2-201ENST00000414579 1873 ntBASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 RPL23AP52-201ENST00000439311 478 ntBASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 PHBP16-201ENST00000446318 950 ntBASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 AL157385.1-201ENST00000446973 268 ntBASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 FCF1P7-201ENST00000451185 558 ntBASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 RPL7P32-201ENST00000457119 744 ntBASIC5.27□□□□□ -1.57
SHROOM1Q2M3G4 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms