Protein–RNA interactions for Protein: Q16656

NRF1, Nuclear respiratory factor 1, humanhuman

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NRF1Q16656 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.3□□□□□ -1.72
NRF1Q16656 AC105918.1-201ENST00000474399 838 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 AC025445.1-201ENST00000502728 300 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 AC113430.1-201ENST00000506872 718 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC4.3□□□□□ -1.72
NRF1Q16656 AC006499.6-201ENST00000511169 607 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 BTF3P13-201ENST00000513224 490 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 RNU6-751P-201ENST00000516382 101 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 DUX4L52-201ENST00000549363 777 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.3□□□□□ -1.72
NRF1Q16656 AC105129.1-201ENST00000560250 297 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.3□□□□□ -1.72
NRF1Q16656 UBE2FP2-201ENST00000566646 462 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 CYP4A43P-201ENST00000568156 121 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC4.3□□□□□ -1.72
NRF1Q16656 TTN-AS1-237ENST00000590743 812 ntTSL 5 BASIC4.3□□□□□ -1.72
NRF1Q16656 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.3□□□□□ -1.72
NRF1Q16656 AC234771.5-201ENST00000600161 514 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 AF230666.2-201ENST00000602328 725 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 OR7A19P-201ENST00000608051 733 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 AC117490.2-201ENST00000610042 594 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 AL391597.1-201ENST00000618707 694 ntBASIC4.3□□□□□ -1.72
NRF1Q16656 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NRF1Q16656 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NRF1Q16656 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.3□□□□□ -1.72
NRF1Q16656 LINC02389-201ENST00000535058 3546 ntTSL 2 BASIC4.3□□□□□ -1.72
NRF1Q16656 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.3□□□□□ -1.72
NRF1Q16656 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.3□□□□□ -1.72
NRF1Q16656 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
NRF1Q16656 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.3□□□□□ -1.72
NRF1Q16656 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
NRF1Q16656 AC011266.1-201ENST00000624119 3569 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NRF1Q16656 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NRF1Q16656 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NRF1Q16656 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
NRF1Q16656 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NRF1Q16656 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NRF1Q16656 RNU1-15P-201ENST00000353977 144 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.29□□□□□ -1.72
NRF1Q16656 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.29□□□□□ -1.72
NRF1Q16656 SNORA56-201ENST00000383966 129 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 GALNT3-202ENST00000409882 2107 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NRF1Q16656 SNORA79B-201ENST00000410557 148 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 AC016397.1-201ENST00000412463 242 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 AL591848.1-201ENST00000413092 322 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.29□□□□□ -1.72
NRF1Q16656 RPL26P29-201ENST00000415623 438 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 AC007559.1-201ENST00000428736 355 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 OR2B7P-201ENST00000429302 934 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 AC122136.1-201ENST00000443971 478 ntTSL 3 BASIC4.29□□□□□ -1.72
NRF1Q16656 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.29□□□□□ -1.72
NRF1Q16656 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC4.29□□□□□ -1.72
NRF1Q16656 RNU6-775P-201ENST00000459318 96 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.29□□□□□ -1.72
NRF1Q16656 AC108043.1-201ENST00000512696 574 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 SNORA26.10-201ENST00000516427 141 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 AP002981.1-201ENST00000517692 975 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 NPM1P52-201ENST00000518264 846 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC4.29□□□□□ -1.72
NRF1Q16656 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC4.29□□□□□ -1.72
NRF1Q16656 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NRF1Q16656 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC4.29□□□□□ -1.72
NRF1Q16656 AL358913.1-201ENST00000554342 121 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 ST20-203ENST00000562759 694 ntAPPRIS P1 TSL 2 BASIC4.29□□□□□ -1.72
NRF1Q16656 AC091042.1-201ENST00000579213 173 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.29□□□□□ -1.72
NRF1Q16656 MTRNR2L12-201ENST00000600213 1049 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
NRF1Q16656 AC103792.1-201ENST00000603591 919 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 AL391358.1-201ENST00000605342 190 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 AP002360.3-201ENST00000607673 710 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 AL031666.3-201ENST00000609320 1006 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC4.29□□□□□ -1.72
NRF1Q16656 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
NRF1Q16656 AC132825.1-201ENST00000463573 2247 ntBASIC4.29□□□□□ -1.72
NRF1Q16656 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
NRF1Q16656 AC007681.1-201ENST00000604271 3438 ntTSL 4 BASIC4.28□□□□□ -1.72
NRF1Q16656 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.28□□□□□ -1.72
NRF1Q16656 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.28□□□□□ -1.72
NRF1Q16656 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.28□□□□□ -1.72
NRF1Q16656 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NRF1Q16656 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC4.28□□□□□ -1.72
NRF1Q16656 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NRF1Q16656 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NRF1Q16656 OR5M3-201ENST00000312240 1051 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
NRF1Q16656 RNVU1-6-201ENST00000364688 164 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.28□□□□□ -1.72
NRF1Q16656 RNA5SP39-201ENST00000411245 120 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC4.28□□□□□ -1.72
NRF1Q16656 RSU1P3-201ENST00000412878 835 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.28□□□□□ -1.72
NRF1Q16656 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC4.28□□□□□ -1.72
NRF1Q16656 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
NRF1Q16656 AC106901.1-201ENST00000425086 698 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 HMGB1P32-201ENST00000425971 565 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
NRF1Q16656 NANOGP6-201ENST00000429190 847 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 RPL23AP25-201ENST00000430973 463 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 AC097523.2-201ENST00000435551 652 ntBASIC4.28□□□□□ -1.72
NRF1Q16656 AL450263.2-201ENST00000439400 589 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 142.2 ms