Protein–RNA interactions for Protein: Q07699

SCN1B, Sodium channel subunit beta-1, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1BQ07699 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
SCN1BQ07699 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.5□□□□□ -1.69
SCN1BQ07699 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.5□□□□□ -1.69
SCN1BQ07699 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.5□□□□□ -1.69
SCN1BQ07699 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SCN1BQ07699 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN1BQ07699 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.5□□□□□ -1.69
SCN1BQ07699 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN1BQ07699 AGR3-202ENST00000402239 563 ntTSL 2 BASIC4.5□□□□□ -1.69
SCN1BQ07699 RNA5SP146-201ENST00000410743 123 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 RPL21P108-201ENST00000413857 481 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN1BQ07699 AC073521.1-201ENST00000418679 625 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN1BQ07699 SAGE2P-201ENST00000420011 2126 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN1BQ07699 AL139148.1-201ENST00000427122 680 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 AL161722.2-201ENST00000434731 981 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC4.5□□□□□ -1.69
SCN1BQ07699 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN1BQ07699 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN1BQ07699 UBE2V1P5-201ENST00000440070 405 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 AC009263.1-201ENST00000441193 1239 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 RPL7AP61-201ENST00000443410 636 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 MRPL48P1-201ENST00000445390 636 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN1BQ07699 AL096803.2-201ENST00000450032 677 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 AC008379.1-201ENST00000463655 464 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 AC104689.1-201ENST00000473356 768 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 RPL23AP37-201ENST00000479658 549 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.5□□□□□ -1.69
SCN1BQ07699 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN1BQ07699 PPM1AP1-201ENST00000502740 1135 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.5□□□□□ -1.69
SCN1BQ07699 STMN1P2-201ENST00000508435 439 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 AC074087.1-201ENST00000512059 724 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 AC084291.1-201ENST00000544667 548 ntTSL 2 BASIC4.5□□□□□ -1.69
SCN1BQ07699 AC026116.1-201ENST00000551729 474 ntTSL 3 BASIC4.5□□□□□ -1.69
SCN1BQ07699 AL442163.2-201ENST00000553912 710 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 GLRXP2-201ENST00000555594 321 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 AC015720.2-201ENST00000567709 334 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.5□□□□□ -1.69
SCN1BQ07699 CYCSP40-201ENST00000575927 294 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 EIF1P5-201ENST00000585002 234 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 AP000873.2-201ENST00000602381 406 ntTSL 2 BASIC4.5□□□□□ -1.69
SCN1BQ07699 AC027243.2-201ENST00000602530 724 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.5□□□□□ -1.69
SCN1BQ07699 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.5□□□□□ -1.69
SCN1BQ07699 AC018926.3-201ENST00000618841 406 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SCN1BQ07699 AL691477.1-201ENST00000624398 162 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 AC092608.3-201ENST00000625017 386 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.5□□□□□ -1.69
SCN1BQ07699 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN1BQ07699 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
SCN1BQ07699 AL132640.2-201ENST00000559968 1698 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 OR13C1P-202ENST00000641378 2919 ntBASIC4.5□□□□□ -1.69
SCN1BQ07699 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN1BQ07699 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC4.5□□□□□ -1.69
SCN1BQ07699 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
SCN1BQ07699 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
SCN1BQ07699 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN1BQ07699 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN1BQ07699 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN1BQ07699 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
SCN1BQ07699 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
SCN1BQ07699 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
SCN1BQ07699 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.49□□□□□ -1.69
SCN1BQ07699 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCN1BQ07699 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCN1BQ07699 CASC19-206ENST00000641028 1430 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN1BQ07699 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN1BQ07699 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
SCN1BQ07699 OR6K3-202ENST00000368146 996 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
SCN1BQ07699 AP002784.2-201ENST00000397300 549 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC4.49□□□□□ -1.69
SCN1BQ07699 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
SCN1BQ07699 OR4K12P-201ENST00000406538 961 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 SNORA11C-201ENST00000408532 129 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 SDHDP6-201ENST00000414693 480 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN1BQ07699 BMS1P17-202ENST00000416720 316 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN1BQ07699 GTF2IP2-201ENST00000424290 697 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 CKS1BP6-201ENST00000424932 240 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC4.49□□□□□ -1.69
SCN1BQ07699 RPL37P1-201ENST00000432310 284 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN1BQ07699 FABP5P3-201ENST00000437960 408 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 AC006994.1-201ENST00000438212 839 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 AP000949.1-201ENST00000438328 629 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 AC092170.1-201ENST00000440211 356 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.49□□□□□ -1.69
SCN1BQ07699 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN1BQ07699 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.49□□□□□ -1.69
SCN1BQ07699 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC4.49□□□□□ -1.69
SCN1BQ07699 AC005008.1-201ENST00000456151 612 ntBASIC4.49□□□□□ -1.69
SCN1BQ07699 RPL7AP28-201ENST00000464513 571 ntBASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 154.4 ms