Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 MIR6891-201ENST00000618788 93 ntBASIC3.38□□□□□ -1.87
CCL20P78556 AL023881.1-201ENST00000621088 301 ntBASIC3.38□□□□□ -1.87
CCL20P78556 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC3.38□□□□□ -1.87
CCL20P78556 BMS1P21-201ENST00000634565 365 ntBASIC3.38□□□□□ -1.87
CCL20P78556 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CCL20P78556 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCL20P78556 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
CCL20P78556 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCL20P78556 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCL20P78556 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.38□□□□□ -1.87
CCL20P78556 AC108467.2-201ENST00000617640 1597 ntBASIC3.38□□□□□ -1.87
CCL20P78556 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CCL20P78556 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC3.38□□□□□ -1.87
CCL20P78556 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.38□□□□□ -1.87
CCL20P78556 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CCL20P78556 AC010928.1-201ENST00000592477 1447 ntBASIC3.37□□□□□ -1.87
CCL20P78556 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCL20P78556 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC3.37□□□□□ -1.87
CCL20P78556 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
CCL20P78556 RNA5SP105-201ENST00000391123 113 ntBASIC3.37□□□□□ -1.87
CCL20P78556 RAB5CP1-201ENST00000395972 580 ntBASIC3.37□□□□□ -1.87
CCL20P78556 SDHCP2-201ENST00000398565 501 ntBASIC3.37□□□□□ -1.87
CCL20P78556 GLULP6-201ENST00000399502 913 ntBASIC3.37□□□□□ -1.87
CCL20P78556 AMD1P2-201ENST00000412936 992 ntBASIC3.37□□□□□ -1.87
CCL20P78556 IPPKP1-201ENST00000422501 768 ntBASIC3.37□□□□□ -1.87
CCL20P78556 NPM1P26-201ENST00000426339 738 ntBASIC3.37□□□□□ -1.87
CCL20P78556 RPS29P14-201ENST00000431518 171 ntBASIC3.37□□□□□ -1.87
CCL20P78556 AL049745.1-201ENST00000433953 286 ntBASIC3.37□□□□□ -1.87
CCL20P78556 RPS20P1-201ENST00000434853 354 ntBASIC3.37□□□□□ -1.87
CCL20P78556 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC3.37□□□□□ -1.87
CCL20P78556 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC3.37□□□□□ -1.87
CCL20P78556 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCL20P78556 BTF3L4P4-201ENST00000506381 449 ntBASIC3.37□□□□□ -1.87
CCL20P78556 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.37□□□□□ -1.87
CCL20P78556 AC010342.1-201ENST00000514047 877 ntBASIC3.37□□□□□ -1.87
CCL20P78556 IGKV2-38-201ENST00000517443 247 ntBASIC3.37□□□□□ -1.87
CCL20P78556 AC109635.6-201ENST00000525487 1113 ntBASIC3.37□□□□□ -1.87
CCL20P78556 AC092851.1-201ENST00000535964 478 ntBASIC3.37□□□□□ -1.87
CCL20P78556 AC092490.3-201ENST00000545370 572 ntBASIC3.37□□□□□ -1.87
CCL20P78556 AC090515.3-201ENST00000560431 315 ntBASIC3.37□□□□□ -1.87
CCL20P78556 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCL20P78556 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCL20P78556 AC127024.6-201ENST00000621598 424 ntBASIC3.37□□□□□ -1.87
CCL20P78556 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.37□□□□□ -1.87
CCL20P78556 BDP1P-201ENST00000582658 1990 ntBASIC3.37□□□□□ -1.87
CCL20P78556 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCL20P78556 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CCL20P78556 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCL20P78556 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CCL20P78556 NFE2L2-204ENST00000423513 1382 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CCL20P78556 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL20P78556 NCOA1-203ENST00000395856 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL20P78556 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL20P78556 AC125257.1-201ENST00000560400 2930 ntBASIC3.36□□□□□ -1.87
CCL20P78556 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CCL20P78556 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL20P78556 MIR423-201ENST00000362201 94 ntBASIC3.36□□□□□ -1.87
CCL20P78556 MIR365B-201ENST00000362317 111 ntBASIC3.36□□□□□ -1.87
CCL20P78556 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL20P78556 RSU1P3-201ENST00000412878 835 ntBASIC3.36□□□□□ -1.87
CCL20P78556 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL20P78556 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCL20P78556 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL20P78556 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC3.36□□□□□ -1.87
CCL20P78556 MTND4LP13-201ENST00000425022 298 ntBASIC3.36□□□□□ -1.87
CCL20P78556 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL20P78556 RPS26P40-201ENST00000435209 294 ntBASIC3.36□□□□□ -1.87
CCL20P78556 AL162726.1-201ENST00000436084 455 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL20P78556 AL355306.2-209ENST00000437803 357 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL20P78556 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL20P78556 RPL23AP93-201ENST00000440847 484 ntBASIC3.36□□□□□ -1.87
CCL20P78556 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL20P78556 RPL31P15-201ENST00000449770 338 ntBASIC3.36□□□□□ -1.87
CCL20P78556 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC3.36□□□□□ -1.87
CCL20P78556 AC096741.1-201ENST00000472250 846 ntBASIC3.36□□□□□ -1.87
CCL20P78556 OR2AO1P-201ENST00000476497 403 ntBASIC3.36□□□□□ -1.87
CCL20P78556 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL20P78556 AC108693.1-201ENST00000496068 432 ntBASIC3.36□□□□□ -1.87
CCL20P78556 AC104164.2-201ENST00000496953 495 ntBASIC3.36□□□□□ -1.87
CCL20P78556 AC024558.1-201ENST00000505008 528 ntBASIC3.36□□□□□ -1.87
CCL20P78556 HPRT1P2-201ENST00000505250 544 ntBASIC3.36□□□□□ -1.87
CCL20P78556 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.36□□□□□ -1.87
CCL20P78556 AC004980.4-201ENST00000513375 203 ntBASIC3.36□□□□□ -1.87
CCL20P78556 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL20P78556 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL20P78556 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL20P78556 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL20P78556 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL20P78556 AC068446.3-201ENST00000555285 382 ntBASIC3.36□□□□□ -1.87
CCL20P78556 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL20P78556 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.36□□□□□ -1.87
CCL20P78556 GMCL1P2-201ENST00000605230 823 ntBASIC3.36□□□□□ -1.87
CCL20P78556 AC128687.2-201ENST00000609657 566 ntBASIC3.36□□□□□ -1.87
CCL20P78556 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL20P78556 FP325313.1-201ENST00000638228 703 ntBASIC3.36□□□□□ -1.87
CCL20P78556 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.36□□□□□ -1.87
CCL20P78556 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
CCL20P78556 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL20P78556 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CCL20P78556 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 72.3 ms