Protein–RNA interactions for Protein: P78317

RNF4, E3 ubiquitin-protein ligase RNF4, humanhuman

Predictions only

Length 190 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4P78317 CALM2P3-201ENST00000400429 449 ntBASIC5.93□□□□□ -1.46
RNF4P78317 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF4P78317 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF4P78317 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF4P78317 RPL7P30-201ENST00000420888 709 ntBASIC5.93□□□□□ -1.46
RNF4P78317 AC069157.1-201ENST00000421749 137 ntBASIC5.93□□□□□ -1.46
RNF4P78317 OSTCP4-201ENST00000424397 449 ntBASIC5.93□□□□□ -1.46
RNF4P78317 ZYG11AP1-201ENST00000430329 837 ntBASIC5.93□□□□□ -1.46
RNF4P78317 USP9YP8-201ENST00000441913 500 ntBASIC5.93□□□□□ -1.46
RNF4P78317 RPS27AP15-201ENST00000447672 466 ntBASIC5.93□□□□□ -1.46
RNF4P78317 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF4P78317 PPIA-203ENST00000451562 544 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF4P78317 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF4P78317 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC5.93□□□□□ -1.46
RNF4P78317 AC096741.1-201ENST00000472250 846 ntBASIC5.93□□□□□ -1.46
RNF4P78317 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF4P78317 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF4P78317 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF4P78317 AC106800.3-201ENST00000511389 308 ntBASIC5.93□□□□□ -1.46
RNF4P78317 AC046134.1-201ENST00000514454 666 ntBASIC5.93□□□□□ -1.46
RNF4P78317 RNU6-150P-201ENST00000516237 95 ntBASIC5.93□□□□□ -1.46
RNF4P78317 RN7SKP183-201ENST00000517169 324 ntBASIC5.93□□□□□ -1.46
RNF4P78317 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.93□□□□□ -1.46
RNF4P78317 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF4P78317 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RNF4P78317 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF4P78317 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF4P78317 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC5.93□□□□□ -1.46
RNF4P78317 RN7SL475P-201ENST00000583379 298 ntBASIC5.93□□□□□ -1.46
RNF4P78317 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF4P78317 AC112191.3-201ENST00000604371 277 ntBASIC5.93□□□□□ -1.46
RNF4P78317 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF4P78317 AC010200.2-201ENST00000605098 235 ntBASIC5.93□□□□□ -1.46
RNF4P78317 AP001330.5-201ENST00000607176 411 ntBASIC5.93□□□□□ -1.46
RNF4P78317 RNU4-89P-201ENST00000607443 133 ntBASIC5.93□□□□□ -1.46
RNF4P78317 SNORA74.4-201ENST00000607595 199 ntBASIC5.93□□□□□ -1.46
RNF4P78317 AC103710.1-201ENST00000610003 901 ntBASIC5.93□□□□□ -1.46
RNF4P78317 MIR6780B-201ENST00000610307 79 ntBASIC5.93□□□□□ -1.46
RNF4P78317 AL592295.2-201ENST00000612578 206 ntBASIC5.93□□□□□ -1.46
RNF4P78317 AL138960.1-201ENST00000613838 513 ntBASIC5.93□□□□□ -1.46
RNF4P78317 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.93□□□□□ -1.46
RNF4P78317 AP001506.1-201ENST00000615444 211 ntBASIC5.93□□□□□ -1.46
RNF4P78317 MIR6811-201ENST00000620409 58 ntBASIC5.93□□□□□ -1.46
RNF4P78317 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC5.93□□□□□ -1.46
RNF4P78317 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RNF4P78317 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF4P78317 ASNSP1-204ENST00000641977 1664 ntBASIC5.93□□□□□ -1.46
RNF4P78317 AC107021.2-201ENST00000567714 2095 ntBASIC5.93□□□□□ -1.46
RNF4P78317 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
RNF4P78317 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.93□□□□□ -1.46
RNF4P78317 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF4P78317 ACACA-231ENST00000614428 9554 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF4P78317 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF4P78317 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF4P78317 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF4P78317 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF4P78317 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC5.93□□□□□ -1.46
RNF4P78317 DDX18P4-201ENST00000511690 1966 ntBASIC5.93□□□□□ -1.46
RNF4P78317 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF4P78317 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF4P78317 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RNF4P78317 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RNF4P78317 PPBPP2-201ENST00000513150 1362 ntBASIC5.93□□□□□ -1.46
RNF4P78317 CASC19-280ENST00000642102 1351 ntBASIC5.93□□□□□ -1.46
RNF4P78317 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
RNF4P78317 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF4P78317 AC007744.1-201ENST00000607540 2289 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF4P78317 CASC19-246ENST00000641625 1606 ntBASIC5.92□□□□□ -1.46
RNF4P78317 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF4P78317 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF4P78317 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF4P78317 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF4P78317 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RNF4P78317 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
RNF4P78317 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
RNF4P78317 AL592429.1-201ENST00000403909 1473 ntBASIC5.92□□□□□ -1.46
RNF4P78317 AC008033.1-201ENST00000216407 1162 ntBASIC5.92□□□□□ -1.46
RNF4P78317 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
RNF4P78317 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
RNF4P78317 Y_RNA.38-201ENST00000362617 102 ntBASIC5.92□□□□□ -1.46
RNF4P78317 RNU6-115P-201ENST00000364310 107 ntBASIC5.92□□□□□ -1.46
RNF4P78317 RN7SKP171-201ENST00000364417 303 ntBASIC5.92□□□□□ -1.46
RNF4P78317 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF4P78317 RNU6-317P-201ENST00000384031 107 ntBASIC5.92□□□□□ -1.46
RNF4P78317 SNORA51.12-201ENST00000384448 134 ntBASIC5.92□□□□□ -1.46
RNF4P78317 RNU6-809P-201ENST00000384461 107 ntBASIC5.92□□□□□ -1.46
RNF4P78317 MTCO3P40-201ENST00000392516 676 ntBASIC5.92□□□□□ -1.46
RNF4P78317 AL390316.1-201ENST00000406279 553 ntBASIC5.92□□□□□ -1.46
RNF4P78317 MAST4-207ENST00000407621 559 ntTSL 2 BASIC5.92□□□□□ -1.46
RNF4P78317 MTCO1P17-201ENST00000411522 491 ntBASIC5.92□□□□□ -1.46
RNF4P78317 BMS1P17-201ENST00000413661 723 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
RNF4P78317 OR51A5P-201ENST00000415429 942 ntBASIC5.92□□□□□ -1.46
RNF4P78317 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.92□□□□□ -1.46
RNF4P78317 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF4P78317 AC245054.1-201ENST00000420944 258 ntBASIC5.92□□□□□ -1.46
RNF4P78317 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF4P78317 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF4P78317 AL669831.5-205ENST00000429505 441 ntTSL 3 BASIC5.92□□□□□ -1.46
RNF4P78317 AC073464.1-201ENST00000429823 534 ntBASIC5.92□□□□□ -1.46
RNF4P78317 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 124.5 ms