Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC5.87□□□□□ -1.47
YBX1P67809 OR6M2P-201ENST00000529831 871 ntBASIC5.87□□□□□ -1.47
YBX1P67809 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC5.87□□□□□ -1.47
YBX1P67809 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
YBX1P67809 A2MP1-201ENST00000543404 1201 ntTSL 5 BASIC5.87□□□□□ -1.47
YBX1P67809 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
YBX1P67809 LINC02311-202ENST00000556819 477 ntTSL 3 BASIC5.87□□□□□ -1.47
YBX1P67809 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.87□□□□□ -1.47
YBX1P67809 UBE2FP2-201ENST00000566646 462 ntBASIC5.87□□□□□ -1.47
YBX1P67809 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC5.87□□□□□ -1.47
YBX1P67809 AC002519.2-203ENST00000567043 837 ntBASIC5.87□□□□□ -1.47
YBX1P67809 AC100863.1-201ENST00000584843 560 ntTSL 4 BASIC5.87□□□□□ -1.47
YBX1P67809 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.87□□□□□ -1.47
YBX1P67809 MIR132-201ENST00000591554 101 ntBASIC5.87□□□□□ -1.47
YBX1P67809 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.87□□□□□ -1.47
YBX1P67809 AL365503.1-201ENST00000605247 905 ntBASIC5.87□□□□□ -1.47
YBX1P67809 AL353726.1-201ENST00000614041 1000 ntBASIC5.87□□□□□ -1.47
YBX1P67809 AC069234.4-201ENST00000621276 412 ntBASIC5.87□□□□□ -1.47
YBX1P67809 AC018816.2-201ENST00000621460 353 ntBASIC5.87□□□□□ -1.47
YBX1P67809 AC024023.1-201ENST00000624530 922 ntBASIC5.87□□□□□ -1.47
YBX1P67809 AC073488.3-201ENST00000631611 778 ntBASIC5.87□□□□□ -1.47
YBX1P67809 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC5.87□□□□□ -1.47
YBX1P67809 AC109315.1-201ENST00000584143 1347 ntBASIC5.87□□□□□ -1.47
YBX1P67809 RBM22-202ENST00000447771 1386 ntTSL 2 BASIC5.87□□□□□ -1.47
YBX1P67809 AL157700.1-201ENST00000561973 1432 ntBASIC5.87□□□□□ -1.47
YBX1P67809 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.87□□□□□ -1.47
YBX1P67809 CR383658.2-201ENST00000547576 1525 ntBASIC5.87□□□□□ -1.47
YBX1P67809 AL359091.1-201ENST00000449048 1734 ntBASIC5.87□□□□□ -1.47
YBX1P67809 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
YBX1P67809 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
YBX1P67809 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC5.87□□□□□ -1.47
YBX1P67809 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
YBX1P67809 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
YBX1P67809 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
YBX1P67809 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
YBX1P67809 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.87□□□□□ -1.47
YBX1P67809 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
YBX1P67809 ORC4-215ENST00000536575 6328 ntTSL 2 BASIC5.86□□□□□ -1.47
YBX1P67809 MEF2C-249ENST00000637481 6088 ntTSL 5 BASIC5.86□□□□□ -1.47
YBX1P67809 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
YBX1P67809 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
YBX1P67809 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
YBX1P67809 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.86□□□□□ -1.47
YBX1P67809 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
YBX1P67809 MTCO1P23-201ENST00000415223 1526 ntBASIC5.86□□□□□ -1.47
YBX1P67809 LYARP1-201ENST00000436977 1501 ntBASIC5.86□□□□□ -1.47
YBX1P67809 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.86□□□□□ -1.47
YBX1P67809 FOXP2-202ENST00000360232 1412 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
YBX1P67809 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
YBX1P67809 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
YBX1P67809 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.86□□□□□ -1.47
YBX1P67809 ATP5A1P1-201ENST00000454088 1321 ntBASIC5.86□□□□□ -1.47
YBX1P67809 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
YBX1P67809 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.86□□□□□ -1.47
YBX1P67809 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
YBX1P67809 Y_RNA.9-201ENST00000362354 101 ntBASIC5.86□□□□□ -1.47
YBX1P67809 RNU6-374P-201ENST00000364146 108 ntBASIC5.86□□□□□ -1.47
YBX1P67809 RNA5SP433-201ENST00000364491 114 ntBASIC5.86□□□□□ -1.47
YBX1P67809 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
YBX1P67809 ESD-201ENST00000378697 1079 ntTSL 5 BASIC5.86□□□□□ -1.47
YBX1P67809 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC5.86□□□□□ -1.47
YBX1P67809 Y_RNA.450-201ENST00000384198 113 ntBASIC5.86□□□□□ -1.47
YBX1P67809 RNU6-1009P-201ENST00000390996 107 ntBASIC5.86□□□□□ -1.47
YBX1P67809 AC007066.1-201ENST00000392902 381 ntBASIC5.86□□□□□ -1.47
YBX1P67809 RPS3AP23-201ENST00000401762 784 ntBASIC5.86□□□□□ -1.47
YBX1P67809 RPA3-204ENST00000406109 434 ntTSL 3 BASIC5.86□□□□□ -1.47
YBX1P67809 RNU2-65P-201ENST00000410162 185 ntBASIC5.86□□□□□ -1.47
YBX1P67809 AL354890.1-201ENST00000413730 346 ntBASIC5.86□□□□□ -1.47
YBX1P67809 AC062039.1-201ENST00000414394 565 ntTSL 2 BASIC5.86□□□□□ -1.47
YBX1P67809 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.86□□□□□ -1.47
YBX1P67809 FNDC1-IT1-201ENST00000419703 516 ntTSL 3 BASIC5.86□□□□□ -1.47
YBX1P67809 OR5W1P-201ENST00000423705 938 ntBASIC5.86□□□□□ -1.47
YBX1P67809 RPL7P44-201ENST00000424827 742 ntBASIC5.86□□□□□ -1.47
YBX1P67809 AC115283.1-201ENST00000427353 400 ntBASIC5.86□□□□□ -1.47
YBX1P67809 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
YBX1P67809 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.86□□□□□ -1.47
YBX1P67809 AL731534.1-201ENST00000434711 269 ntBASIC5.86□□□□□ -1.47
YBX1P67809 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.86□□□□□ -1.47
YBX1P67809 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.86□□□□□ -1.47
YBX1P67809 HMGN1P2-201ENST00000445197 310 ntBASIC5.86□□□□□ -1.47
YBX1P67809 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC5.86□□□□□ -1.47
YBX1P67809 FTLP8-201ENST00000446770 267 ntBASIC5.86□□□□□ -1.47
YBX1P67809 PNPLA4P1-201ENST00000458328 305 ntBASIC5.86□□□□□ -1.47
YBX1P67809 RPS4XP12-201ENST00000461747 709 ntBASIC5.86□□□□□ -1.47
YBX1P67809 AP000852.1-201ENST00000472460 573 ntBASIC5.86□□□□□ -1.47
YBX1P67809 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
YBX1P67809 RPS7P6-201ENST00000485777 579 ntBASIC5.86□□□□□ -1.47
YBX1P67809 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC5.86□□□□□ -1.47
YBX1P67809 AC091951.2-201ENST00000500762 203 ntBASIC5.86□□□□□ -1.47
YBX1P67809 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC5.86□□□□□ -1.47
YBX1P67809 HMGB1P44-201ENST00000508597 572 ntBASIC5.86□□□□□ -1.47
YBX1P67809 AC108120.2-201ENST00000512973 294 ntBASIC5.86□□□□□ -1.47
YBX1P67809 RNU6-875P-201ENST00000516488 106 ntBASIC5.86□□□□□ -1.47
YBX1P67809 RNA5SP340-201ENST00000517132 107 ntBASIC5.86□□□□□ -1.47
YBX1P67809 IGLVIV-64-201ENST00000518581 301 ntBASIC5.86□□□□□ -1.47
YBX1P67809 AC087808.1-201ENST00000520501 361 ntBASIC5.86□□□□□ -1.47
YBX1P67809 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC5.86□□□□□ -1.47
YBX1P67809 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC5.86□□□□□ -1.47
YBX1P67809 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.86□□□□□ -1.47
YBX1P67809 AP003080.1-202ENST00000526526 915 ntBASIC5.86□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 143.6 ms