Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC5.7□□□□□ -1.5
RIPK4P57078 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC5.7□□□□□ -1.5
RIPK4P57078 AP002981.1-201ENST00000517692 975 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
RIPK4P57078 AC090151.1-201ENST00000520784 730 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC5.7□□□□□ -1.5
RIPK4P57078 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.7□□□□□ -1.5
RIPK4P57078 AC023575.1-201ENST00000580510 358 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC5.7□□□□□ -1.5
RIPK4P57078 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.7□□□□□ -1.5
RIPK4P57078 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.7□□□□□ -1.5
RIPK4P57078 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 SNX18P1Y-201ENST00000616231 511 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RIPK4P57078 AC007546.1-201ENST00000619452 559 ntBASIC5.7□□□□□ -1.5
RIPK4P57078 OR2M2-202ENST00000641211 1229 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RIPK4P57078 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
RIPK4P57078 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC5.7□□□□□ -1.5
RIPK4P57078 AC116158.1-201ENST00000560231 2129 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 OR5AQ1P-203ENST00000641818 1529 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RIPK4P57078 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK4P57078 RNA5SP175-201ENST00000364275 119 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 RNA5SP366-201ENST00000365454 123 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
RIPK4P57078 AL139039.2-201ENST00000407436 479 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK4P57078 MFSD13B-201ENST00000420133 1290 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 RPL7L1P1-201ENST00000448259 785 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC5.69□□□□□ -1.5
RIPK4P57078 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC5.69□□□□□ -1.5
RIPK4P57078 AC010618.1-201ENST00000469924 477 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 AC091167.1-201ENST00000492017 396 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 RN7SL691P-201ENST00000494487 301 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 LINC01060-205ENST00000512839 716 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK4P57078 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.69□□□□□ -1.5
RIPK4P57078 CYCSP29-201ENST00000533731 318 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 AP001804.2-201ENST00000533932 910 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 MIR3939-201ENST00000582614 106 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 LINC02565-201ENST00000592678 478 ntTSL 2 BASIC5.69□□□□□ -1.5
RIPK4P57078 LINC01862-201ENST00000593792 478 ntTSL 2 BASIC5.69□□□□□ -1.5
RIPK4P57078 PDZPH1P-202ENST00000602846 722 ntTSL 3 BASIC5.69□□□□□ -1.5
RIPK4P57078 AC005034.4-201ENST00000603612 899 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 AC025175.1-201ENST00000606482 759 ntBASIC5.69□□□□□ -1.5
RIPK4P57078 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK4P57078 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK4P57078 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK4P57078 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC5.69□□□□□ -1.5
RIPK4P57078 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.69□□□□□ -1.5
RIPK4P57078 DDR2-202ENST00000367922 10160 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK4P57078 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK4P57078 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK4P57078 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RIPK4P57078 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.68□□□□□ -1.5
RIPK4P57078 AC017104.4-201ENST00000636283 1592 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK4P57078 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK4P57078 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
RIPK4P57078 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK4P57078 OR6C69P-201ENST00000394268 893 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK4P57078 MIR1911-201ENST00000410783 80 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 RAB28P1-201ENST00000411517 641 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 RPL23AP26-201ENST00000412728 464 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 AC009237.10-201ENST00000414112 510 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.68□□□□□ -1.5
RIPK4P57078 AL157831.1-201ENST00000426134 473 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 ACTR3P2-201ENST00000439585 1257 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.68□□□□□ -1.5
RIPK4P57078 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC5.68□□□□□ -1.5
RIPK4P57078 TPT1P12-201ENST00000448968 492 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC5.68□□□□□ -1.5
RIPK4P57078 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC5.68□□□□□ -1.5
RIPK4P57078 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
RIPK4P57078 RN7SKP122-201ENST00000515923 296 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 RNA5SP49-201ENST00000516450 115 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 AL352979.3-201ENST00000553515 247 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 GLRXP2-201ENST00000555594 321 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 AL590392.1-201ENST00000604960 446 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 ARF4P1-201ENST00000605447 541 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 AL445567.2-201ENST00000618935 498 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 AL445363.3-201ENST00000623080 671 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK4P57078 AC138627.1-204ENST00000641894 765 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK4P57078 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.68□□□□□ -1.5
RIPK4P57078 MTCO1P46-201ENST00000451639 1491 ntBASIC5.68□□□□□ -1.5
RIPK4P57078 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC5.68□□□□□ -1.5
RIPK4P57078 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK4P57078 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RIPK4P57078 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK4P57078 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RIPK4P57078 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RIPK4P57078 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK4P57078 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.67□□□□□ -1.5
RIPK4P57078 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC5.67□□□□□ -1.5
RIPK4P57078 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK4P57078 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RIPK4P57078 RNU1-20P-201ENST00000363314 162 ntBASIC5.67□□□□□ -1.5
RIPK4P57078 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms