Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 MIR320B1-201ENST00000390209 79 ntBASIC4.76□□□□□ -1.65
CDH12P55289 IGLV7-43-201ENST00000390298 385 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDH12P55289 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
CDH12P55289 AL078599.1-201ENST00000402075 293 ntBASIC4.76□□□□□ -1.65
CDH12P55289 RNU6ATAC18P-201ENST00000408413 101 ntBASIC4.76□□□□□ -1.65
CDH12P55289 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH12P55289 AP000357.1-201ENST00000409926 1165 ntBASIC4.76□□□□□ -1.65
CDH12P55289 RNA5SP498-201ENST00000411342 120 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AL390774.1-201ENST00000411924 246 ntBASIC4.76□□□□□ -1.65
CDH12P55289 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH12P55289 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH12P55289 OR6K4P-201ENST00000423179 955 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH12P55289 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH12P55289 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH12P55289 AL122019.1-201ENST00000438575 798 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH12P55289 EEF1A1P39-201ENST00000440791 250 ntBASIC4.76□□□□□ -1.65
CDH12P55289 RPL7AP61-201ENST00000443410 636 ntBASIC4.76□□□□□ -1.65
CDH12P55289 MTCYBP42-201ENST00000444653 1130 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH12P55289 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
CDH12P55289 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH12P55289 CDC42P1-201ENST00000456658 548 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AC107015.1-201ENST00000466902 747 ntBASIC4.76□□□□□ -1.65
CDH12P55289 NDUFA5P9-201ENST00000472609 340 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AC004263.1-201ENST00000479327 332 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AC011037.1-201ENST00000483964 558 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AP000563.1-201ENST00000490865 758 ntBASIC4.76□□□□□ -1.65
CDH12P55289 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH12P55289 AC097173.1-201ENST00000505862 819 ntBASIC4.76□□□□□ -1.65
CDH12P55289 HMGB3P16-201ENST00000508037 287 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AC092593.2-201ENST00000513866 913 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH12P55289 RNU6-941P-201ENST00000516346 108 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH12P55289 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH12P55289 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH12P55289 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH12P55289 DEFB130C-202ENST00000530001 230 ntBASIC4.76□□□□□ -1.65
CDH12P55289 MTCO2P15-201ENST00000532655 656 ntBASIC4.76□□□□□ -1.65
CDH12P55289 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
CDH12P55289 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH12P55289 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.76□□□□□ -1.65
CDH12P55289 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH12P55289 AC027104.1-201ENST00000563702 681 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AC023813.2-201ENST00000564321 469 ntBASIC4.76□□□□□ -1.65
CDH12P55289 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AC095057.3-201ENST00000567102 1157 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH12P55289 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC4.76□□□□□ -1.65
CDH12P55289 AC006272.2-201ENST00000594725 163 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AC092747.4-201ENST00000620519 1861 ntBASIC4.76□□□□□ -1.65
CDH12P55289 AC011447.7-201ENST00000624228 1590 ntBASIC4.76□□□□□ -1.65
CDH12P55289 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH12P55289 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.76□□□□□ -1.65
CDH12P55289 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
CDH12P55289 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.76□□□□□ -1.65
CDH12P55289 AC073055.1-201ENST00000456901 1621 ntBASIC4.75□□□□□ -1.65
CDH12P55289 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.75□□□□□ -1.65
CDH12P55289 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC4.75□□□□□ -1.65
CDH12P55289 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 RNA5SP90-201ENST00000364801 99 ntBASIC4.75□□□□□ -1.65
CDH12P55289 CENPW-203ENST00000368328 750 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.75□□□□□ -1.65
CDH12P55289 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
CDH12P55289 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
CDH12P55289 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 RNU1-149P-201ENST00000390870 161 ntBASIC4.75□□□□□ -1.65
CDH12P55289 ATP5F1P2-201ENST00000398143 760 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AC119751.3-201ENST00000399720 670 ntBASIC4.75□□□□□ -1.65
CDH12P55289 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.75□□□□□ -1.65
CDH12P55289 AL136131.1-201ENST00000406079 803 ntBASIC4.75□□□□□ -1.65
CDH12P55289 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 RNA5SP178-201ENST00000410380 128 ntBASIC4.75□□□□□ -1.65
CDH12P55289 RN7SKP222-201ENST00000410651 315 ntBASIC4.75□□□□□ -1.65
CDH12P55289 RN7SKP293-201ENST00000411389 296 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AL356320.2-201ENST00000417263 507 ntBASIC4.75□□□□□ -1.65
CDH12P55289 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH12P55289 GTF2IP2-201ENST00000424290 697 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 AL139148.1-201ENST00000427122 680 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 FTH1P16-201ENST00000435241 552 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AL592437.1-201ENST00000443781 492 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 HMGB3P6-201ENST00000444896 598 ntBASIC4.75□□□□□ -1.65
CDH12P55289 CASP3P1-201ENST00000446037 609 ntBASIC4.75□□□□□ -1.65
CDH12P55289 RNF148-202ENST00000447240 839 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH12P55289 BTF3P6-201ENST00000448054 499 ntBASIC4.75□□□□□ -1.65
CDH12P55289 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC4.75□□□□□ -1.65
CDH12P55289 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.75□□□□□ -1.65
CDH12P55289 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms