Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 5_8S_rRNA.1-201ENST00000614365 152 ntBASIC4.66□□□□□ -1.66
CDH4P55283 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH4P55283 RAD17P1-201ENST00000418130 2042 ntBASIC4.66□□□□□ -1.66
CDH4P55283 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.66□□□□□ -1.66
CDH4P55283 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
CDH4P55283 DPY19L2P2-203ENST00000435536 1858 ntBASIC4.66□□□□□ -1.66
CDH4P55283 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH4P55283 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH4P55283 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
CDH4P55283 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.66□□□□□ -1.66
CDH4P55283 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC4.66□□□□□ -1.66
CDH4P55283 LINC00622-201ENST00000562811 1570 ntBASIC4.65□□□□□ -1.66
CDH4P55283 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.65□□□□□ -1.66
CDH4P55283 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.65□□□□□ -1.66
CDH4P55283 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH4P55283 AC139713.2-215ENST00000641428 5037 ntBASIC4.65□□□□□ -1.66
CDH4P55283 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
CDH4P55283 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.65□□□□□ -1.66
CDH4P55283 AL133268.1-201ENST00000405676 1401 ntBASIC4.65□□□□□ -1.66
CDH4P55283 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH4P55283 RNU1-32P-201ENST00000363937 159 ntBASIC4.65□□□□□ -1.67
CDH4P55283 FCF1P5-201ENST00000406490 482 ntBASIC4.65□□□□□ -1.67
CDH4P55283 CASKP1-201ENST00000412870 582 ntBASIC4.65□□□□□ -1.67
CDH4P55283 RPL7AP25-201ENST00000423357 805 ntBASIC4.65□□□□□ -1.67
CDH4P55283 AP001324.1-201ENST00000428553 399 ntBASIC4.65□□□□□ -1.67
CDH4P55283 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH4P55283 AL392003.1-201ENST00000434394 243 ntBASIC4.65□□□□□ -1.67
CDH4P55283 H2AFZP6-201ENST00000444403 394 ntBASIC4.65□□□□□ -1.67
CDH4P55283 CASP3P1-201ENST00000446037 609 ntBASIC4.65□□□□□ -1.67
CDH4P55283 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH4P55283 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CDH4P55283 HMGN1P8-201ENST00000463578 288 ntBASIC4.65□□□□□ -1.67
CDH4P55283 AL591473.1-201ENST00000464297 313 ntBASIC4.65□□□□□ -1.67
CDH4P55283 AC112206.1-201ENST00000468416 477 ntBASIC4.65□□□□□ -1.67
CDH4P55283 AC022795.1-201ENST00000473808 480 ntBASIC4.65□□□□□ -1.67
CDH4P55283 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH4P55283 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH4P55283 AC107918.3-201ENST00000533272 382 ntBASIC4.65□□□□□ -1.67
CDH4P55283 OR8X1P-201ENST00000534542 869 ntBASIC4.65□□□□□ -1.67
CDH4P55283 AC027281.1-201ENST00000574178 758 ntBASIC4.65□□□□□ -1.67
CDH4P55283 AC091178.1-203ENST00000584586 279 ntBASIC4.65□□□□□ -1.67
CDH4P55283 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.65□□□□□ -1.67
CDH4P55283 IMMP1LP1-201ENST00000605170 488 ntBASIC4.65□□□□□ -1.67
CDH4P55283 AC234782.5-201ENST00000617723 324 ntBASIC4.65□□□□□ -1.67
CDH4P55283 AL133370.2-201ENST00000619934 439 ntBASIC4.65□□□□□ -1.67
CDH4P55283 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.65□□□□□ -1.67
CDH4P55283 MIR7641-1-201ENST00000627518 61 ntBASIC4.65□□□□□ -1.67
CDH4P55283 LINC01289-201ENST00000519550 3712 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CDH4P55283 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
CDH4P55283 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC4.65□□□□□ -1.67
CDH4P55283 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.65□□□□□ -1.67
CDH4P55283 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH4P55283 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH4P55283 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC4.64□□□□□ -1.67
CDH4P55283 VN2R3P-201ENST00000422626 1412 ntBASIC4.64□□□□□ -1.67
CDH4P55283 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH4P55283 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH4P55283 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH4P55283 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.64□□□□□ -1.67
CDH4P55283 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CDH4P55283 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH4P55283 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH4P55283 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CDH4P55283 OR52B1P-201ENST00000316506 909 ntBASIC4.64□□□□□ -1.67
CDH4P55283 AC012358.3-203ENST00000366287 1110 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH4P55283 AL034403.1-201ENST00000399414 885 ntBASIC4.64□□□□□ -1.67
CDH4P55283 FAR2P2-201ENST00000413041 594 ntBASIC4.64□□□□□ -1.67
CDH4P55283 AL807761.1-201ENST00000417622 171 ntBASIC4.64□□□□□ -1.67
CDH4P55283 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH4P55283 AC009480.2-201ENST00000422916 432 ntBASIC4.64□□□□□ -1.67
CDH4P55283 FAR2P4-202ENST00000425399 584 ntBASIC4.64□□□□□ -1.67
CDH4P55283 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH4P55283 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH4P55283 RPL23AP43-201ENST00000446445 471 ntBASIC4.64□□□□□ -1.67
CDH4P55283 CCRL1P1-201ENST00000449542 1053 ntBASIC4.64□□□□□ -1.67
CDH4P55283 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC4.64□□□□□ -1.67
CDH4P55283 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH4P55283 CREM-220ENST00000463314 964 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH4P55283 AC108751.2-201ENST00000469993 231 ntBASIC4.64□□□□□ -1.67
CDH4P55283 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH4P55283 LINC01088-205ENST00000509088 756 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CDH4P55283 AC147055.1-201ENST00000509261 750 ntBASIC4.64□□□□□ -1.67
CDH4P55283 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
CDH4P55283 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH4P55283 MTHFD2P4-201ENST00000515074 1025 ntBASIC4.64□□□□□ -1.67
CDH4P55283 SEC11B-201ENST00000518383 499 ntBASIC4.64□□□□□ -1.67
CDH4P55283 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH4P55283 AC087888.1-201ENST00000550884 1254 ntBASIC4.64□□□□□ -1.67
CDH4P55283 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH4P55283 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.64□□□□□ -1.67
CDH4P55283 AC104984.2-201ENST00000582938 385 ntTSL 3 BASIC4.64□□□□□ -1.67
CDH4P55283 BPIFA4P-203ENST00000603168 689 ntBASIC4.64□□□□□ -1.67
CDH4P55283 AC233280.2-201ENST00000603917 1070 ntBASIC4.64□□□□□ -1.67
CDH4P55283 AC008966.2-201ENST00000606157 453 ntBASIC4.64□□□□□ -1.67
CDH4P55283 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC4.64□□□□□ -1.67
CDH4P55283 AC097505.1-201ENST00000610199 565 ntBASIC4.64□□□□□ -1.67
CDH4P55283 AC012409.3-201ENST00000611343 981 ntBASIC4.64□□□□□ -1.67
CDH4P55283 LINC00901.1-201ENST00000617252 152 ntBASIC4.64□□□□□ -1.67
CDH4P55283 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.64□□□□□ -1.67
CDH4P55283 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms