Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLCN3P51790 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCN3P51790 CYCSP42-201ENST00000450823 238 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCN3P51790 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCN3P51790 AC108043.1-201ENST00000512696 574 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 MTHFD2P4-201ENST00000515074 1025 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCN3P51790 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCN3P51790 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC5.21□□□□□ -1.58
CLCN3P51790 AC026401.1-201ENST00000549756 530 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCN3P51790 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCN3P51790 FKBP1BP1-201ENST00000553366 325 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 AC109462.2-201ENST00000558730 763 ntTSL 3 BASIC5.21□□□□□ -1.58
CLCN3P51790 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.21□□□□□ -1.58
CLCN3P51790 AC010487.1-201ENST00000594408 1172 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 AC093765.1-201ENST00000603758 881 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 AC018645.2-201ENST00000609151 472 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 MIR8084-201ENST00000614105 89 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.21□□□□□ -1.58
CLCN3P51790 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CLCN3P51790 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCN3P51790 VPS35P1-201ENST00000563400 1518 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCN3P51790 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC5.21□□□□□ -1.58
CLCN3P51790 TECRL-201ENST00000381210 3573 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCN3P51790 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLCN3P51790 SYCP1-210ENST00000618516 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCN3P51790 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLCN3P51790 AC005005.4-201ENST00000623789 16698 ntBASIC5.21□□□□□ -1.58
CLCN3P51790 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCN3P51790 A1CF-207ENST00000395495 9400 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCN3P51790 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCN3P51790 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCN3P51790 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCN3P51790 KARSP3-201ENST00000571212 1504 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLCN3P51790 AL590762.2-201ENST00000395798 571 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCN3P51790 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
CLCN3P51790 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCN3P51790 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCN3P51790 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCN3P51790 RPL23AP1-201ENST00000428990 471 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 AC012512.1-201ENST00000446594 718 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 AC108463.1-201ENST00000450258 347 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCN3P51790 AL592161.1-201ENST00000456389 861 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCN3P51790 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCN3P51790 RPL36AP41-201ENST00000493820 306 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCN3P51790 AP001978.1-201ENST00000526851 834 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCN3P51790 OR8X1P-201ENST00000534542 869 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCN3P51790 AL158211.1-201ENST00000566763 763 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 AC009852.2-201ENST00000567898 485 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 MIR4715-201ENST00000584117 79 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 MIR4760-201ENST00000585040 80 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC5.2□□□□□ -1.58
CLCN3P51790 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCN3P51790 RPL26P30-202ENST00000602923 645 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 ABI1P1-201ENST00000603375 1120 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCN3P51790 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCN3P51790 AC019193.2-201ENST00000610012 634 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 AC095038.2-201ENST00000621464 1070 ntBASIC5.2□□□□□ -1.58
CLCN3P51790 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC5.2□□□□□ -1.58
CLCN3P51790 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLCN3P51790 AC139769.2-201ENST00000599944 2291 ntTSL 2 BASIC5.2□□□□□ -1.58
CLCN3P51790 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
CLCN3P51790 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCN3P51790 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN3P51790 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN3P51790 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN3P51790 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN3P51790 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CLCN3P51790 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 GCNT6-201ENST00000379591 934 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CLCN3P51790 RNA5SP397-201ENST00000391323 118 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLCN3P51790 RPL5P19-201ENST00000404228 893 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 RNU2-17P-201ENST00000410290 190 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 RN7SKP267-201ENST00000410381 285 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 SNORA79B-201ENST00000410557 148 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCN3P51790 AC104333.2-201ENST00000422630 192 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 OR6K4P-201ENST00000423179 955 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 HSPE1P16-201ENST00000426640 348 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 CNOT7P1-201ENST00000429006 852 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC5.19□□□□□ -1.58
CLCN3P51790 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCN3P51790 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCN3P51790 NDUFA5P9-201ENST00000472609 340 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.19□□□□□ -1.58
CLCN3P51790 SETP6-201ENST00000479329 568 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 AC097512.1-203ENST00000506425 957 ntTSL 3 BASIC5.19□□□□□ -1.58
CLCN3P51790 AC119751.4-201ENST00000507498 357 ntBASIC5.19□□□□□ -1.58
CLCN3P51790 CDV3-208ENST00000511392 554 ntTSL 5 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms