Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
BRCA2P51587 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC4.51□□□□□ -1.69
BRCA2P51587 ESD-201ENST00000378697 1079 ntTSL 5 BASIC4.51□□□□□ -1.69
BRCA2P51587 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC4.51□□□□□ -1.69
BRCA2P51587 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC4.51□□□□□ -1.69
BRCA2P51587 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.51□□□□□ -1.69
BRCA2P51587 AC012493.2-201ENST00000595083 291 ntBASIC4.51□□□□□ -1.69
BRCA2P51587 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
BRCA2P51587 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC4.51□□□□□ -1.69
BRCA2P51587 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRCA2P51587 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRCA2P51587 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC4.51□□□□□ -1.69
BRCA2P51587 LRIG2-201ENST00000361127 11555 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRCA2P51587 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.51□□□□□ -1.69
BRCA2P51587 TAF1-203ENST00000373790 7629 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRCA2P51587 UTY-209ENST00000537580 6490 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BRCA2P51587 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC4.51□□□□□ -1.69
BRCA2P51587 AC106707.2-201ENST00000484182 374 ntBASIC4.51□□□□□ -1.69
BRCA2P51587 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.51□□□□□ -1.69
BRCA2P51587 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC4.51□□□□□ -1.69
BRCA2P51587 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.51□□□□□ -1.69
BRCA2P51587 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BRCA2P51587 DGKB-202ENST00000402815 5595 ntAPPRIS ALT1 TSL 5 BASIC4.51□□□□□ -1.69
BRCA2P51587 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRCA2P51587 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
BRCA2P51587 NAIP-208ENST00000517649 6124 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRCA2P51587 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC4.51□□□□□ -1.69
BRCA2P51587 MAVS-202ENST00000428216 11714 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
BRCA2P51587 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRCA2P51587 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.5□□□□□ -1.69
BRCA2P51587 RNA5SP453-201ENST00000362503 119 ntBASIC4.5□□□□□ -1.69
BRCA2P51587 CTSL3P-202ENST00000412179 788 ntBASIC4.5□□□□□ -1.69
BRCA2P51587 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.5□□□□□ -1.69
BRCA2P51587 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.5□□□□□ -1.69
BRCA2P51587 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC4.5□□□□□ -1.69
BRCA2P51587 AL031666.3-201ENST00000609320 1006 ntBASIC4.5□□□□□ -1.69
BRCA2P51587 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.5□□□□□ -1.69
BRCA2P51587 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.5□□□□□ -1.69
BRCA2P51587 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
BRCA2P51587 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRCA2P51587 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BRCA2P51587 MR1-204ENST00000367580 7704 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRCA2P51587 PCNPP4-201ENST00000414817 517 ntBASIC4.5□□□□□ -1.69
BRCA2P51587 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.5□□□□□ -1.69
BRCA2P51587 AC004938.1-201ENST00000438468 308 ntBASIC4.5□□□□□ -1.69
BRCA2P51587 AC125257.1-201ENST00000560400 2930 ntBASIC4.5□□□□□ -1.69
BRCA2P51587 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRCA2P51587 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.5□□□□□ -1.69
BRCA2P51587 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC4.5□□□□□ -1.69
BRCA2P51587 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
BRCA2P51587 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRCA2P51587 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC4.5□□□□□ -1.69
BRCA2P51587 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRCA2P51587 PPBP-201ENST00000296028 715 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRCA2P51587 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC4.5□□□□□ -1.69
BRCA2P51587 GLS-204ENST00000409428 816 ntTSL 2 BASIC4.5□□□□□ -1.69
BRCA2P51587 RPS4XP10-201ENST00000465034 731 ntBASIC4.5□□□□□ -1.69
BRCA2P51587 AC010486.1-201ENST00000511793 424 ntBASIC4.5□□□□□ -1.69
BRCA2P51587 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.5□□□□□ -1.69
BRCA2P51587 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC4.5□□□□□ -1.69
BRCA2P51587 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC4.5□□□□□ -1.69
BRCA2P51587 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
BRCA2P51587 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC4.49□□□□□ -1.69
BRCA2P51587 KLF7-202ENST00000412414 7954 ntTSL 2 BASIC4.49□□□□□ -1.69
BRCA2P51587 LRRC8B-203ENST00000439853 7474 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRCA2P51587 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.49□□□□□ -1.69
BRCA2P51587 OR6K3-202ENST00000368146 996 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 SNORA48.5-201ENST00000391143 135 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 AL590609.2-201ENST00000421430 368 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC4.49□□□□□ -1.69
BRCA2P51587 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.49□□□□□ -1.69
BRCA2P51587 AC013412.1-201ENST00000610687 192 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC4.49□□□□□ -1.69
BRCA2P51587 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRCA2P51587 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRCA2P51587 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRCA2P51587 CSNK1G1-201ENST00000303052 8179 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRCA2P51587 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRCA2P51587 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.49□□□□□ -1.69
BRCA2P51587 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
BRCA2P51587 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
BRCA2P51587 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRCA2P51587 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
BRCA2P51587 AL136164.3-201ENST00000624429 3978 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRCA2P51587 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.49□□□□□ -1.69
BRCA2P51587 RPS29P19-201ENST00000479709 171 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 RPL5P23-201ENST00000496040 868 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
BRCA2P51587 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRCA2P51587 AC092376.2-201ENST00000622621 4116 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 AL592182.3-201ENST00000642132 3304 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.49□□□□□ -1.69
BRCA2P51587 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.49□□□□□ -1.69
BRCA2P51587 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
BRCA2P51587 ANKRD36P1-201ENST00000344424 659 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 NACA3P-201ENST00000359690 648 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 AC007546.2-201ENST00000623996 360 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 AL137141.1-201ENST00000624622 4836 ntBASIC4.49□□□□□ -1.69
BRCA2P51587 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms