Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPN9P43378 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPN9P43378 GTF2IP12-201ENST00000456547 356 ntBASIC5.16□□□□□ -1.58
PTPN9P43378 TPT1P1-201ENST00000458495 518 ntBASIC5.16□□□□□ -1.58
PTPN9P43378 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPN9P43378 RN7SL319P-201ENST00000480656 221 ntBASIC5.16□□□□□ -1.58
PTPN9P43378 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPN9P43378 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPN9P43378 AC096571.1-202ENST00000506634 735 ntBASIC5.16□□□□□ -1.58
PTPN9P43378 AC147055.3-201ENST00000510547 851 ntBASIC5.16□□□□□ -1.58
PTPN9P43378 Y_RNA.719-201ENST00000517156 106 ntBASIC5.16□□□□□ -1.58
PTPN9P43378 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN9P43378 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC5.16□□□□□ -1.58
PTPN9P43378 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPN9P43378 AC122134.1-201ENST00000565664 1104 ntBASIC5.16□□□□□ -1.58
PTPN9P43378 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPN9P43378 MIR4472-2-201ENST00000582069 67 ntBASIC5.16□□□□□ -1.58
PTPN9P43378 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPN9P43378 AL022067.1-201ENST00000602426 454 ntBASIC5.16□□□□□ -1.58
PTPN9P43378 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN9P43378 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.16□□□□□ -1.58
PTPN9P43378 AL353662.3-201ENST00000625131 237 ntBASIC5.16□□□□□ -1.58
PTPN9P43378 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
PTPN9P43378 AL731532.2-201ENST00000623542 1953 ntBASIC5.16□□□□□ -1.58
PTPN9P43378 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN9P43378 ZNF849P-201ENST00000594711 1566 ntBASIC5.16□□□□□ -1.58
PTPN9P43378 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN9P43378 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PTPN9P43378 SCN11A-202ENST00000444237 5729 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
PTPN9P43378 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.16□□□□□ -1.58
PTPN9P43378 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PTPN9P43378 AC097461.1-201ENST00000568928 2821 ntBASIC5.15□□□□□ -1.58
PTPN9P43378 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.15□□□□□ -1.58
PTPN9P43378 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC5.15□□□□□ -1.58
PTPN9P43378 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTPN9P43378 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
PTPN9P43378 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.15□□□□□ -1.58
PTPN9P43378 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTPN9P43378 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
PTPN9P43378 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
PTPN9P43378 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
PTPN9P43378 MTCO1P15-201ENST00000529569 1526 ntBASIC5.15□□□□□ -1.58
PTPN9P43378 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PTPN9P43378 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.58
PTPN9P43378 DSCR8-201ENST00000357704 552 ntAPPRIS P5 TSL 2 BASIC5.15□□□□□ -1.59
PTPN9P43378 SIRPD-201ENST00000381621 823 ntAPPRIS ALT2 TSL 3 BASIC5.15□□□□□ -1.59
PTPN9P43378 RNU6-532P-201ENST00000384318 107 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 RNU6-185P-201ENST00000384421 107 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 ANAPC10P1-201ENST00000395991 556 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTPN9P43378 MRM2-202ENST00000407040 582 ntTSL 3 BASIC5.15□□□□□ -1.59
PTPN9P43378 METTL5-204ENST00000409340 472 ntTSL 5 BASIC5.15□□□□□ -1.59
PTPN9P43378 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC5.15□□□□□ -1.59
PTPN9P43378 HMGB3P31-201ENST00000413333 595 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.15□□□□□ -1.59
PTPN9P43378 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC5.15□□□□□ -1.59
PTPN9P43378 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC5.15□□□□□ -1.59
PTPN9P43378 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC5.15□□□□□ -1.59
PTPN9P43378 MTCO1P52-201ENST00000433928 531 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 RPL7P11-201ENST00000437586 658 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 AC000041.1-201ENST00000439655 175 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC5.15□□□□□ -1.59
PTPN9P43378 CCNB1IP1P3-201ENST00000454702 829 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 GYG1P1-201ENST00000460864 698 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 AC020898.1-201ENST00000474167 787 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC5.15□□□□□ -1.59
PTPN9P43378 AC037198.2-201ENST00000478845 733 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.15□□□□□ -1.59
PTPN9P43378 AC140172.1-201ENST00000502928 141 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTPN9P43378 MRPS33P2-201ENST00000507850 322 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 AC096759.1-201ENST00000510744 473 ntTSL 3 BASIC5.15□□□□□ -1.59
PTPN9P43378 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.15□□□□□ -1.59
PTPN9P43378 LINC02553-201ENST00000529088 734 ntTSL 5 BASIC5.15□□□□□ -1.59
PTPN9P43378 AC005868.1-201ENST00000536421 331 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.15□□□□□ -1.59
PTPN9P43378 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC5.15□□□□□ -1.59
PTPN9P43378 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.15□□□□□ -1.59
PTPN9P43378 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC5.15□□□□□ -1.59
PTPN9P43378 AC087763.1-201ENST00000603391 286 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC5.15□□□□□ -1.59
PTPN9P43378 EIF3FP1-201ENST00000613970 806 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 AC015914.2-201ENST00000618167 288 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 VPS29-212ENST00000621131 1124 ntTSL 3 BASIC5.15□□□□□ -1.59
PTPN9P43378 AC019206.1-201ENST00000621938 425 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 AC021106.3-201ENST00000623925 531 ntBASIC5.15□□□□□ -1.59
PTPN9P43378 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.15□□□□□ -1.59
PTPN9P43378 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC5.15□□□□□ -1.59
PTPN9P43378 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTPN9P43378 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.15□□□□□ -1.59
PTPN9P43378 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC5.15□□□□□ -1.59
PTPN9P43378 NKIRAS1-209ENST00000614374 1612 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
PTPN9P43378 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
PTPN9P43378 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.14□□□□□ -1.59
PTPN9P43378 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PTPN9P43378 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.14□□□□□ -1.59
PTPN9P43378 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.14□□□□□ -1.59
PTPN9P43378 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
PTPN9P43378 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.14□□□□□ -1.59
PTPN9P43378 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms