Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD13P35453 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXD13P35453 AC133555.2-201ENST00000550213 292 ntBASIC5.24□□□□□ -1.57
HOXD13P35453 AC005154.1-213ENST00000578572 445 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXD13P35453 MIR4436B2-201ENST00000581415 91 ntBASIC5.24□□□□□ -1.57
HOXD13P35453 MIR4436B1-201ENST00000583272 91 ntBASIC5.24□□□□□ -1.57
HOXD13P35453 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXD13P35453 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.24□□□□□ -1.57
HOXD13P35453 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXD13P35453 MTATP6P2-201ENST00000603319 678 ntBASIC5.24□□□□□ -1.57
HOXD13P35453 AL031320.1-201ENST00000604177 357 ntBASIC5.24□□□□□ -1.57
HOXD13P35453 IMMP1LP1-201ENST00000605170 488 ntBASIC5.24□□□□□ -1.57
HOXD13P35453 FAM27B-201ENST00000610601 213 ntBASIC5.24□□□□□ -1.57
HOXD13P35453 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXD13P35453 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD13P35453 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC5.24□□□□□ -1.57
HOXD13P35453 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD13P35453 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD13P35453 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.24□□□□□ -1.57
HOXD13P35453 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
HOXD13P35453 ARHGAP42P1-201ENST00000507474 1976 ntBASIC5.24□□□□□ -1.57
HOXD13P35453 MAPK10-349ENST00000641767 3661 ntBASIC5.24□□□□□ -1.57
HOXD13P35453 AL451142.2-201ENST00000429076 2090 ntBASIC5.24□□□□□ -1.57
HOXD13P35453 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD13P35453 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXD13P35453 MTCO1P4-201ENST00000520516 1409 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD13P35453 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD13P35453 SCARNA15-201ENST00000607520 4325 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.23□□□□□ -1.57
HOXD13P35453 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HOXD13P35453 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
HOXD13P35453 MIR92A2-201ENST00000385299 75 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 RNU1-82P-201ENST00000390851 165 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AL590762.2-201ENST00000395798 571 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AL645733.1-201ENST00000402250 217 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AL592291.1-201ENST00000403830 352 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 VTA1P1-201ENST00000414044 866 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXD13P35453 AC009965.2-201ENST00000425328 970 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AC104837.2-201ENST00000427236 424 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AC005189.1-201ENST00000431286 310 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AL589765.3-201ENST00000446084 462 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 TPMTP4-201ENST00000450749 678 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXD13P35453 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD13P35453 AC063943.1-201ENST00000465434 453 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 SETP6-201ENST00000479329 568 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC5.23□□□□□ -1.57
HOXD13P35453 OR7H2P-201ENST00000513483 306 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXD13P35453 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXD13P35453 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.23□□□□□ -1.57
HOXD13P35453 AP000676.2-201ENST00000529711 301 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AC092451.2-201ENST00000538746 658 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AL390726.5-202ENST00000564800 256 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AC015911.5-201ENST00000587076 451 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC5.23□□□□□ -1.57
HOXD13P35453 AC010200.2-201ENST00000605098 235 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AC120053.1-201ENST00000607706 736 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 NAA60-237ENST00000615865 326 ntTSL 5 BASIC5.23□□□□□ -1.57
HOXD13P35453 AC131971.1-201ENST00000332881 1482 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC5.23□□□□□ -1.57
HOXD13P35453 IFI16-201ENST00000295809 2867 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
HOXD13P35453 AC005005.4-201ENST00000623789 16698 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
HOXD13P35453 MTCO1P18-201ENST00000455518 1419 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 AC008432.1-201ENST00000615912 1320 ntBASIC5.23□□□□□ -1.57
HOXD13P35453 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
HOXD13P35453 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXD13P35453 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD13P35453 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD13P35453 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HOXD13P35453 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD13P35453 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD13P35453 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXD13P35453 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD13P35453 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD13P35453 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
HOXD13P35453 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
HOXD13P35453 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.22□□□□□ -1.57
HOXD13P35453 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
HOXD13P35453 VDAC2P1-201ENST00000399358 958 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 RN7SKP125-201ENST00000410481 302 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 RNA5SP296-201ENST00000410523 111 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 RN7SKP100-201ENST00000411258 284 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD13P35453 AC092570.3-201ENST00000420113 693 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD13P35453 UBE2D3P3-201ENST00000426992 425 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 AC093422.3-201ENST00000428506 305 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC5.22□□□□□ -1.57
HOXD13P35453 AL592494.1-201ENST00000437523 309 ntTSL 5 BASIC5.22□□□□□ -1.57
HOXD13P35453 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD13P35453 AC108463.1-201ENST00000450258 347 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.22□□□□□ -1.57
HOXD13P35453 EIF4A1P11-201ENST00000451239 222 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 RPS5P7-201ENST00000456664 608 ntBASIC5.22□□□□□ -1.57
HOXD13P35453 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC5.22□□□□□ -1.57
HOXD13P35453 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms