Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 AL513548.1-201ENST00000562904 1724 ntBASIC5.6□□□□□ -1.51
RFC4P35249 PTER-201ENST00000298942 3448 ntTSL 5 BASIC5.6□□□□□ -1.51
RFC4P35249 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFC4P35249 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC4P35249 STAMBPL1-202ENST00000371924 2208 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFC4P35249 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC4P35249 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFC4P35249 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFC4P35249 PTMAP2-201ENST00000397627 327 ntBASIC5.59□□□□□ -1.51
RFC4P35249 RNA5SP44-201ENST00000410446 133 ntBASIC5.59□□□□□ -1.51
RFC4P35249 GNG5P5-201ENST00000420444 220 ntBASIC5.59□□□□□ -1.51
RFC4P35249 BX119904.3-201ENST00000428194 957 ntBASIC5.59□□□□□ -1.51
RFC4P35249 BTF3P10-201ENST00000433415 495 ntBASIC5.59□□□□□ -1.51
RFC4P35249 RPL5P32-201ENST00000454085 879 ntBASIC5.59□□□□□ -1.51
RFC4P35249 AC091959.2-201ENST00000477363 321 ntBASIC5.59□□□□□ -1.51
RFC4P35249 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC4P35249 KATNBL1P4-201ENST00000503545 918 ntBASIC5.59□□□□□ -1.51
RFC4P35249 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC4P35249 RNA5SP497-201ENST00000516081 97 ntBASIC5.59□□□□□ -1.51
RFC4P35249 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.59□□□□□ -1.51
RFC4P35249 AC006116.5-201ENST00000591936 559 ntBASIC5.59□□□□□ -1.51
RFC4P35249 BPIFA4P-203ENST00000603168 689 ntBASIC5.59□□□□□ -1.51
RFC4P35249 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC4P35249 AP000569.1-201ENST00000607953 591 ntTSL 2 BASIC5.59□□□□□ -1.51
RFC4P35249 MIR6075-201ENST00000620782 95 ntBASIC5.59□□□□□ -1.51
RFC4P35249 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.59□□□□□ -1.51
RFC4P35249 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
RFC4P35249 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
RFC4P35249 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.59□□□□□ -1.51
RFC4P35249 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC5.59□□□□□ -1.51
RFC4P35249 KRTAP24-1-201ENST00000340345 1650 ntAPPRIS P1 BASIC5.59□□□□□ -1.52
RFC4P35249 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
RFC4P35249 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC5.59□□□□□ -1.52
RFC4P35249 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.59□□□□□ -1.52
RFC4P35249 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.58□□□□□ -1.52
RFC4P35249 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFC4P35249 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.58□□□□□ -1.52
RFC4P35249 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.58□□□□□ -1.52
RFC4P35249 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFC4P35249 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC5.58□□□□□ -1.52
RFC4P35249 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFC4P35249 SNORA70.4-201ENST00000365509 134 ntBASIC5.58□□□□□ -1.52
RFC4P35249 RNA5SP187-201ENST00000384400 119 ntBASIC5.58□□□□□ -1.52
RFC4P35249 AL080315.1-201ENST00000406055 466 ntBASIC5.58□□□□□ -1.52
RFC4P35249 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.58□□□□□ -1.52
RFC4P35249 RPL6P29-201ENST00000414863 865 ntBASIC5.58□□□□□ -1.52
RFC4P35249 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
RFC4P35249 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC5.58□□□□□ -1.52
RFC4P35249 EIF4A2P2-201ENST00000455776 1070 ntBASIC5.58□□□□□ -1.52
RFC4P35249 RNU6-943P-201ENST00000516960 98 ntBASIC5.58□□□□□ -1.52
RFC4P35249 AC105233.3-201ENST00000531125 744 ntBASIC5.58□□□□□ -1.52
RFC4P35249 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC5.58□□□□□ -1.52
RFC4P35249 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC5.58□□□□□ -1.52
RFC4P35249 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
RFC4P35249 AC024220.1-201ENST00000603675 484 ntBASIC5.58□□□□□ -1.52
RFC4P35249 CDRT1-208ENST00000630868 794 ntBASIC5.58□□□□□ -1.52
RFC4P35249 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.58□□□□□ -1.52
RFC4P35249 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
RFC4P35249 SMG1P4-204ENST00000523028 4131 ntBASIC5.58□□□□□ -1.52
RFC4P35249 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.57□□□□□ -1.52
RFC4P35249 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFC4P35249 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFC4P35249 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFC4P35249 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFC4P35249 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RFC4P35249 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
RFC4P35249 HMGB3P5-201ENST00000428894 612 ntBASIC5.57□□□□□ -1.52
RFC4P35249 MRPL50P1-201ENST00000431951 384 ntBASIC5.57□□□□□ -1.52
RFC4P35249 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC5.57□□□□□ -1.52
RFC4P35249 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC4P35249 AC104651.2-201ENST00000447549 528 ntBASIC5.57□□□□□ -1.52
RFC4P35249 AC114982.2-201ENST00000461396 358 ntBASIC5.57□□□□□ -1.52
RFC4P35249 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC4P35249 AC090686.1-201ENST00000481577 749 ntBASIC5.57□□□□□ -1.52
RFC4P35249 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.57□□□□□ -1.52
RFC4P35249 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RFC4P35249 ZCCHC10-209ENST00000513541 794 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
RFC4P35249 RNA5SP230-201ENST00000517039 122 ntBASIC5.57□□□□□ -1.52
RFC4P35249 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC5.57□□□□□ -1.52
RFC4P35249 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC5.57□□□□□ -1.52
RFC4P35249 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC4P35249 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC4P35249 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.57□□□□□ -1.52
RFC4P35249 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC5.57□□□□□ -1.52
RFC4P35249 AC053481.4-201ENST00000583164 216 ntBASIC5.57□□□□□ -1.52
RFC4P35249 AC025175.1-201ENST00000606482 759 ntBASIC5.57□□□□□ -1.52
RFC4P35249 OR51C1P-201ENST00000608504 942 ntBASIC5.57□□□□□ -1.52
RFC4P35249 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.57□□□□□ -1.52
RFC4P35249 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RFC4P35249 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
RFC4P35249 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RFC4P35249 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
RFC4P35249 AL355852.1-201ENST00000454081 1771 ntBASIC5.57□□□□□ -1.52
RFC4P35249 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC5.57□□□□□ -1.52
RFC4P35249 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
RFC4P35249 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RFC4P35249 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
RFC4P35249 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
RFC4P35249 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
RFC4P35249 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms